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INTERFERENCE

Filter By

Current Database

  • EMDB [54]

Current status

  • REL [54]

Sample type

  • Complex [47]
  • Protein [47]
  • RNA [29]
  • Ligand [26]
  • DNA [11]
  • Sample [7]

Organism

  • Streptococcus thermophilus [8]
  • Homo sapiens [8]
  • Mus musculus [7]
  • Pseudomonas oleovorans [7]
  • Escherichia coli [6]
  • Caenorhabditis elegans [5]
  • Synthetic construct [4]
  • Plasmodium falciparum [4]
  • Klebsiella pneumoniae [4]
  • Biggievirus mos11 [3]
  • Pyrococcus furiosus [3]
  • Escherichia coli [3]
  • Escherichia phage p1 [2]
  • Streptococcus thermophilus [2]
  • Phage #d [2]
  • Pseudomonas phage phikz [1]
  • Arabidopsis thaliana [1]
  • Bordetella pertussis [1]
  • Vibrio phage icp1_2004_a [1]
  • Bos taurus [1]

EM Method

  • Single-particle [52]
  • Helical reconstruction [1]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [30]
  • ≥ 4Å and < 5Å [4]
  • ≥ 5Å and < 6Å [2]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [5]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [18]
  • 250-500 kDa [19]
  • 1-2 MDa [1]

Release Date

  • 2026 [3]
  • 2025 [6]
  • 2024 [20]
  • 2023 [2]
  • 2021 [5]
  • 2018 [11]
  • 2014 [7]

Author by name

  • Pausch P [14]
  • Wang J [12]
  • Becker H [11]
  • Benz F [11]
  • Camara-wilpert S [11]
  • Cepaite R [11]
  • Hochberg GKA [11]
  • Klein N [11]
  • Malinauskaite L [11]
  • Miksys A [11]
  • Pinilla-redondo R [11]
  • Ragozius V [11]
  • Randau L [11]
  • Skorupskaite A [11]
  • Steube N [11]
  • Zvejyte G [11]
  • Artamonova D [8]
  • Liu L [8]
  • Ma J [8]
  • Severinov K [8]
  • Wang M [8]
  • Wang Y [8]
  • Xiang H [8]
  • You L [8]
  • Zhang X [8]
  • Aprikian P [6]
  • Dickinson MS [6]
  • Hvorecny KL [6]
  • Interlandi G [6]
  • Klevit RE [6]
  • Kollman JM [6]
  • Magala P [6]
  • Manchenko A [6]
  • Quispe JD [6]
  • Riley NM [6]
  • Sokurenko EV [6]
  • Tchesnokova VL [6]
  • Veth TS [6]
  • Doudna JA [5]
  • Nogales E [5]
  • Bozdech Z [4]
  • Chung Z [4]
  • El Sahili A [4]
  • Gao YG [4]
  • Lescar J [4]
  • Liew CW [4]
  • Lin J [4]
  • Lin JQ [4]
  • Liu Z [4]
  • Pechnikova EV [4]
  • Preiser PR [4]
  • Yan X [4]
  • Yan XF [4]
  • Al-shayeb B [3]
  • Awazu T [3]
  • Banfield JF [3]
  • Bhattacharya N [3]
  • Cheng H [3]
  • Cocozaki A [3]
  • Elmore J [3]
  • Hale C [3]
  • Herbst DA [3]
  • Hiraizumi M [3]
  • Kambara T [3]
  • Kato T [3]
  • Ke X [3]
  • Kise Y [3]
  • Kumazaki K [3]
  • Kusakizako T [3]
  • Li H [3]
  • Murakoshi S [3]
  • Nishizawa T [3]
  • Nureki O [3]
  • Okada T [3]
  • Ramia NF [3]
  • Shao Y [3]
  • Soczek K [3]
  • Soczek KM [3]
  • Spilman M [3]
  • Stagg SM [3]
  • Sun L [3]
  • Takai A [3]
  • Tang L [3]
  • Terns MP [3]
  • Terns RM [3]
  • Tsuchida CA [3]
  • Wang HW [3]
  • Zhang QC [3]
  • Bhat P [2]
  • Chen X [2]
  • Cong Y [2]
  • Fan J [2]
  • Gong D [2]
  • Gong DS [2]
  • Gong J [2]
  • Guegler CK [2]
  • Hochstrasser ML [2]
  • Jiang D [2]
  • Jiang DH [2]
  • Li M [2]

Author by ORCID

  • Steube N [11]
  • Pausch P [11]
  • Randau L [11]
  • Skorupskaite A [11]
  • Benz F [11]
  • Miksys A [11]
  • Hochberg GKA [11]
  • Malinauskaite L [11]
  • Pinilla-redondo R [11]
  • Klein N [11]
  • Ragozius V [11]
  • Zvejyte G [11]
  • Becker H [11]
  • Artamonova D [8]
  • Ma J [8]
  • Liu L [8]
  • Manchenko A [6]
  • Kollman JM [6]
  • Riley NM [6]
  • Veth TS [6]
  • Klevit RE [6]
  • Hvorecny KL [6]
  • Yan X [4]
  • Gao YG [4]
  • Chung Z [4]
  • Lescar J [4]
  • Bozdech Z [4]
  • El Sahili A [4]
  • Preiser PR [4]
  • Lin J [4]
  • Stagg SM [3]
  • Doudna JA [3]
  • Nogales E [3]
  • Al-shayeb B [3]
  • Liu Z [3]
  • Ke X [3]
  • Sun L [3]
  • Li H [3]
  • Shao Y [3]
  • Soczek KM [3]
  • Herbst DA [3]
  • Elmore J [3]
  • Cheng H [3]
  • Gong D [2]
  • Sternberg SH [2]
  • Fan J [2]
  • Jiang D [2]
  • Hochstrasser ML [2]
  • Zhang J [2]
  • Li M [2]
  • Zhan C [2]
  • Taylor DW [2]
  • Lu Y [2]
  • Guegler CK [2]
  • Bhat P [2]
  • Gong J [2]
  • Meyer JR [1]
  • Corbett KD [1]
  • Meza GN [1]
  • Navratna V [1]
  • Pogliano J [1]
  • Lea SM [1]
  • Raunser S [1]
  • Zhang L [1]
  • Llaguno MC [1]
  • Wang J [1]
  • Grabow WW [1]
  • Panigaj M [1]
  • Feng Y [1]
  • Suslov S [1]
  • Lau RK [1]
  • Mosalaganti S [1]
  • Gao Z [1]
  • Yang M [1]
  • Zeng J [1]
  • Afonin KA [1]
  • Bieling P [1]
  • Morgan CJ [1]
  • Jongerius I [1]
  • Lee J [1]
  • Pogliano K [1]
  • Johnson S [1]
  • Wang H [1]
  • Kumar A [1]
  • Zhang Y [1]
  • Furlong E [1]
  • Armbruster E [1]
  • Birkholz EA [1]
  • Merino F [1]
  • Rottner K [1]
  • Villa E [1]
  • Rangarajan S [1]

Journal

  • NAT COMMUN [18]
  • CELL [11]
  • NAT STRUCT MOL BIOL [5]
  • COMMUN BIOL [4]
  • CELL REP [3]
  • TO BE PUBLISHED [3]
  • NUCLEIC ACIDS RES [2]
  • PNAS [2]
  • BIORXIV [1]
  • J STRUCT BIOL [1]
  • LIFE SCI ALLIANCE [1]
  • MBIO [1]
  • NANO LETTERS [1]
  • NAT CHEM BIOL [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [16]
  • RELION [8]
  • EMAN1, SPIDER [2]
  • EMAN2, SPARX [2]
  • CTFFIND [1]
  • DYNAMO [1]
  • EMAN1, SPIDER, IHRSR [1]
  • EMAN2 [1]
  • IMAGIC, SPIDER, EMAN [1]
  • PHENIX [1]
  • SIMPLE [1]
  • SPHIRE [1]
  • UCSF CHIMERAX [1]
  • WARP [1]

Microscope

  • FEI TITAN KRIOS [26]
  • TFS GLACIOS [12]
  • TFS KRIOS [8]
  • FEI TALOS ARCTICA [4]
  • FEI TECNAI 20 [2]
  • JEOL 2010F [1]
  • JEOL 2200FS [1]

Electron Source

  • FIELD EMISSION GUN [54]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [16]
  • FEI FALCON III 4K X 4K [12]
  • GATAN K3 BIOQUANTUM 6K X 4K [10]
  • GATAN ULTRASCAN 4000 4K X 4K [6]
  • GATAN K3 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [4]
  • KODAK SO-163 FILM [1]

External links

  • UniProt [41]
  • PDB [39]
  • PDBe-Kb [33]
  • AlphaFold DB [31]
  • ChEBI [26]
  • ChEMBL [26]
  • DrugBank [26]
  • Pfam [21]
  • Gene Ontology [20]
  • InterPro [19]
  • Complex Portal [6]
  • SCOP2 [1]
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Showing 1 - 10 of 54. Page 1 of 6
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EMD-62888
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3D View
Structure of SID-1 in complex with dsRNA dodecameric form
Release date: Jan. 28, 2026
Resolution: 3.99 Å
EM Method: Single-particle
Fitted PDBs: 9l8o
Q-score: 0.239

Takai A, Kumazaki K, Awazu T, Kambara T, Murakoshi S, Kato T, Hiraizumi M, Kise Y, Kusakizako T, Nishizawa T, Okada T, Nureki O

To Be Published

EMD-62886
Download Map
3D View
Structure of SID-1 in complex with dsRNA
Release date: Jan. 21, 2026
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 9l8m
Q-score: 0.587

Takai A, Kumazaki K, Awazu T, Kambara T, Murakoshi S, Kato T, Hiraizumi M, Kise Y, Kusakizako T, Nishizawa T, Okada T, Nureki O

To Be Published

EMD-62887
Download Map
3D View
Structure of SID-1
Release date: Jan. 21, 2026
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9l8n
Q-score: 0.472

Takai A, Kumazaki K, Awazu T, Kambara T, Murakoshi S, Kato T, Hiraizumi M, Kise Y, Kusakizako T, Nishizawa T, Okada T, Nureki O

To Be Published

EMD-48183
Download Map
3D View
Antibody fragments from mAb475 and mAb824 bound to the adhesin protein FimH
Release date: Nov. 26, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9me4
Q-score: 0.517

Hvorecny KL, Interlandi G, Veth TS, Aprikian P, Manchenko A, Tchesnokova VL, Dickinson MS, Quispe JD, Riley NM, Klevit RE, Magala P, Sokurenko EV, Kollman JM

Nat Commun (2025) 16 pp. 10590-10590 [ Pubmed: 41298446 DOI: doi:10.1038/s41467-025-65666-3 ]

EMD-48184
Download Map
3D View
Antibody fragments from mAb824 and mAb926 bound to the adhesin protein FimH
Release date: Nov. 26, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9me5
Q-score: 0.553

Hvorecny KL, Interlandi G, Veth TS, Aprikian P, Manchenko A, Tchesnokova VL, Dickinson MS, Quispe JD, Riley NM, Klevit RE, Magala P, Sokurenko EV, Kollman JM

Nat Commun (2025) 16 pp. 10590-10590 [ Pubmed: 41298446 DOI: doi:10.1038/s41467-025-65666-3 ]

EMD-48185
Download Map
3D View
Antibody fragments from mAb21, mAb475, and mAb824 bound to the adhesin protein FimH
Release date: Nov. 26, 2025
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9me6
Q-score: 0.573

Hvorecny KL, Interlandi G, Veth TS, Aprikian P, Manchenko A, Tchesnokova VL, Dickinson MS, Quispe JD, Riley NM, Klevit RE, Magala P, Sokurenko EV, Kollman JM

Nat Commun (2025) 16 pp. 10590-10590 [ Pubmed: 41298446 DOI: doi:10.1038/s41467-025-65666-3 ]

EMD-48186
Download Map
3D View
Antibody fragments from mAb21 and mAb824 bound to the adhesin protein FimH containing alpha-methyl mannose
Release date: Nov. 26, 2025
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 9me7
Q-score: 0.579

Hvorecny KL, Interlandi G, Veth TS, Aprikian P, Manchenko A, Tchesnokova VL, Dickinson MS, Quispe JD, Riley NM, Klevit RE, Magala P, Sokurenko EV, Kollman JM

Nat Commun (2025) 16 pp. 10590-10590 [ Pubmed: 41298446 DOI: doi:10.1038/s41467-025-65666-3 ]

EMD-48187
Download Map
3D View
Antibody fragments from mAb21 and mAb475 bound to the fimbrial tip protein, FimH
Release date: Nov. 26, 2025
Resolution: 5.8 Å
EM Method: Single-particle

Hvorecny KL, Interlandi G, Veth TS, Aprikian P, Manchenko A, Tchesnokova VL, Dickinson MS, Quispe JD, Riley NM, Klevit RE, Magala P, Sokurenko EV, Kollman JM

Nat Commun (2025) 16 pp. 10590-10590 [ Pubmed: 41298446 DOI: doi:10.1038/s41467-025-65666-3 ]

EMD-71842
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3D View
Antibody fragment from mAb824 bound to the adhesin protein FimH.
Release date: Nov. 26, 2025
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 9ptm
Q-score: 0.496

Hvorecny KL, Interlandi G, Veth TS, Aprikian P, Manchenko A, Tchesnokova VL, Dickinson MS, Quispe JD, Riley NM, Klevit RE, Magala P, Sokurenko EV, Kollman JM

Nat Commun (2025) 16 pp. 10590-10590 [ Pubmed: 41298446 DOI: doi:10.1038/s41467-025-65666-3 ]

EMD-19045
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3D View
DNA bound type IV-A3 CRISPR effector complex from K. pneumoniae
Release date: Nov. 6, 2024
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8rc2
Q-score: 0.518

Cepaite R, Klein N, Miksys A, Camara-Wilpert S, Ragozius V, Benz F, Skorupskaite A, Becker H, Zvejyte G, Steube N, Hochberg GKA, Randau L, Pinilla-Redondo R, Malinauskaite L, Pausch P

Nat Commun (2024) 15 pp. 9306-9306 [ DOI: doi:10.1038/s41467-024-53778-1 Pubmed: 39468082 ]

Sort by: Download
Showing 1 - 10 of 54. Page 1 of 6
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Filter By

Current Database

  • EMDB [54]

Current status

  • REL [54]

Sample type

  • Complex [47]
  • Protein [47]
  • RNA [29]
  • Ligand [26]
  • DNA [11]
  • Sample [7]

Organism

  • Streptococcus thermophilus [8]
  • Homo sapiens [8]
  • Mus musculus [7]
  • Pseudomonas oleovorans [7]
  • Escherichia coli [6]
  • Caenorhabditis elegans [5]
  • Synthetic construct [4]
  • Plasmodium falciparum [4]
  • Klebsiella pneumoniae [4]
  • Biggievirus mos11 [3]
  • Pyrococcus furiosus [3]
  • Escherichia coli [3]
  • Escherichia phage p1 [2]
  • Streptococcus thermophilus [2]
  • Phage #d [2]
  • Pseudomonas phage phikz [1]
  • Arabidopsis thaliana [1]
  • Bordetella pertussis [1]
  • Vibrio phage icp1_2004_a [1]
  • Bos taurus [1]

EM Method

  • Single-particle [52]
  • Helical reconstruction [1]
  • Subtomogram averaging [1]

Resolution

  • ≥ 2Å and < 3Å [10]
  • ≥ 3Å and < 4Å [30]
  • ≥ 4Å and < 5Å [4]
  • ≥ 5Å and < 6Å [2]
  • ≥ 8Å and < 12Å [1]
  • ≥ 12Å and < 16Å [5]
  • ≥ 16Å and < 20Å [1]
  • ≥ 20Å and < 30Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [18]
  • 250-500 kDa [19]
  • 1-2 MDa [1]

Release Date

  • 2026 [3]
  • 2025 [6]
  • 2024 [20]
  • 2023 [2]
  • 2021 [5]
  • 2018 [11]
  • 2014 [7]

Author by name

  • Pausch P [14]
  • Wang J [12]
  • Becker H [11]
  • Benz F [11]
  • Camara-wilpert S [11]
  • Cepaite R [11]
  • Hochberg GKA [11]
  • Klein N [11]
  • Malinauskaite L [11]
  • Miksys A [11]
  • Pinilla-redondo R [11]
  • Ragozius V [11]
  • Randau L [11]
  • Skorupskaite A [11]
  • Steube N [11]
  • Zvejyte G [11]
  • Artamonova D [8]
  • Liu L [8]
  • Ma J [8]
  • Severinov K [8]
  • Wang M [8]
  • Wang Y [8]
  • Xiang H [8]
  • You L [8]
  • Zhang X [8]
  • Aprikian P [6]
  • Dickinson MS [6]
  • Hvorecny KL [6]
  • Interlandi G [6]
  • Klevit RE [6]
  • Kollman JM [6]
  • Magala P [6]
  • Manchenko A [6]
  • Quispe JD [6]
  • Riley NM [6]
  • Sokurenko EV [6]
  • Tchesnokova VL [6]
  • Veth TS [6]
  • Doudna JA [5]
  • Nogales E [5]
  • Bozdech Z [4]
  • Chung Z [4]
  • El Sahili A [4]
  • Gao YG [4]
  • Lescar J [4]
  • Liew CW [4]
  • Lin J [4]
  • Lin JQ [4]
  • Liu Z [4]
  • Pechnikova EV [4]
  • Preiser PR [4]
  • Yan X [4]
  • Yan XF [4]
  • Al-shayeb B [3]
  • Awazu T [3]
  • Banfield JF [3]
  • Bhattacharya N [3]
  • Cheng H [3]
  • Cocozaki A [3]
  • Elmore J [3]
  • Hale C [3]
  • Herbst DA [3]
  • Hiraizumi M [3]
  • Kambara T [3]
  • Kato T [3]
  • Ke X [3]
  • Kise Y [3]
  • Kumazaki K [3]
  • Kusakizako T [3]
  • Li H [3]
  • Murakoshi S [3]
  • Nishizawa T [3]
  • Nureki O [3]
  • Okada T [3]
  • Ramia NF [3]
  • Shao Y [3]
  • Soczek K [3]
  • Soczek KM [3]
  • Spilman M [3]
  • Stagg SM [3]
  • Sun L [3]
  • Takai A [3]
  • Tang L [3]
  • Terns MP [3]
  • Terns RM [3]
  • Tsuchida CA [3]
  • Wang HW [3]
  • Zhang QC [3]
  • Bhat P [2]
  • Chen X [2]
  • Cong Y [2]
  • Fan J [2]
  • Gong D [2]
  • Gong DS [2]
  • Gong J [2]
  • Guegler CK [2]
  • Hochstrasser ML [2]
  • Jiang D [2]
  • Jiang DH [2]
  • Li M [2]

Author by ORCID

  • Steube N [11]
  • Pausch P [11]
  • Randau L [11]
  • Skorupskaite A [11]
  • Benz F [11]
  • Miksys A [11]
  • Hochberg GKA [11]
  • Malinauskaite L [11]
  • Pinilla-redondo R [11]
  • Klein N [11]
  • Ragozius V [11]
  • Zvejyte G [11]
  • Becker H [11]
  • Artamonova D [8]
  • Ma J [8]
  • Liu L [8]
  • Manchenko A [6]
  • Kollman JM [6]
  • Riley NM [6]
  • Veth TS [6]
  • Klevit RE [6]
  • Hvorecny KL [6]
  • Yan X [4]
  • Gao YG [4]
  • Chung Z [4]
  • Lescar J [4]
  • Bozdech Z [4]
  • El Sahili A [4]
  • Preiser PR [4]
  • Lin J [4]
  • Stagg SM [3]
  • Doudna JA [3]
  • Nogales E [3]
  • Al-shayeb B [3]
  • Liu Z [3]
  • Ke X [3]
  • Sun L [3]
  • Li H [3]
  • Shao Y [3]
  • Soczek KM [3]
  • Herbst DA [3]
  • Elmore J [3]
  • Cheng H [3]
  • Gong D [2]
  • Sternberg SH [2]
  • Fan J [2]
  • Jiang D [2]
  • Hochstrasser ML [2]
  • Zhang J [2]
  • Li M [2]
  • Zhan C [2]
  • Taylor DW [2]
  • Lu Y [2]
  • Guegler CK [2]
  • Bhat P [2]
  • Gong J [2]
  • Meyer JR [1]
  • Corbett KD [1]
  • Meza GN [1]
  • Navratna V [1]
  • Pogliano J [1]
  • Lea SM [1]
  • Raunser S [1]
  • Zhang L [1]
  • Llaguno MC [1]
  • Wang J [1]
  • Grabow WW [1]
  • Panigaj M [1]
  • Feng Y [1]
  • Suslov S [1]
  • Lau RK [1]
  • Mosalaganti S [1]
  • Gao Z [1]
  • Yang M [1]
  • Zeng J [1]
  • Afonin KA [1]
  • Bieling P [1]
  • Morgan CJ [1]
  • Jongerius I [1]
  • Lee J [1]
  • Pogliano K [1]
  • Johnson S [1]
  • Wang H [1]
  • Kumar A [1]
  • Zhang Y [1]
  • Furlong E [1]
  • Armbruster E [1]
  • Birkholz EA [1]
  • Merino F [1]
  • Rottner K [1]
  • Villa E [1]
  • Rangarajan S [1]

Journal

  • NAT COMMUN [18]
  • CELL [11]
  • NAT STRUCT MOL BIOL [5]
  • COMMUN BIOL [4]
  • CELL REP [3]
  • TO BE PUBLISHED [3]
  • NUCLEIC ACIDS RES [2]
  • PNAS [2]
  • BIORXIV [1]
  • J STRUCT BIOL [1]
  • LIFE SCI ALLIANCE [1]
  • MBIO [1]
  • NANO LETTERS [1]
  • NAT CHEM BIOL [1]
  • SCIENCE [1]

Software

  • CRYOSPARC [16]
  • RELION [8]
  • EMAN1, SPIDER [2]
  • EMAN2, SPARX [2]
  • CTFFIND [1]
  • DYNAMO [1]
  • EMAN1, SPIDER, IHRSR [1]
  • EMAN2 [1]
  • IMAGIC, SPIDER, EMAN [1]
  • PHENIX [1]
  • SIMPLE [1]
  • SPHIRE [1]
  • UCSF CHIMERAX [1]
  • WARP [1]

Microscope

  • FEI TITAN KRIOS [26]
  • TFS GLACIOS [12]
  • TFS KRIOS [8]
  • FEI TALOS ARCTICA [4]
  • FEI TECNAI 20 [2]
  • JEOL 2010F [1]
  • JEOL 2200FS [1]

Electron Source

  • FIELD EMISSION GUN [54]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [16]
  • FEI FALCON III 4K X 4K [12]
  • GATAN K3 BIOQUANTUM 6K X 4K [10]
  • GATAN ULTRASCAN 4000 4K X 4K [6]
  • GATAN K3 6K X 4K [5]
  • FEI FALCON IV 4K X 4K [4]
  • KODAK SO-163 FILM [1]

External links

  • UniProt [41]
  • PDB [39]
  • PDBe-Kb [33]
  • AlphaFold DB [31]
  • ChEBI [26]
  • ChEMBL [26]
  • DrugBank [26]
  • Pfam [21]
  • Gene Ontology [20]
  • InterPro [19]
  • Complex Portal [6]
  • SCOP2 [1]