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Current Database

  • EMPIAR [20]
  • EMDB [5]

Current status

  • REL [25]

Sample type

  • Complex [5]
  • Protein [3]
  • Ligand [1]

Organism

  • Homo sapiens [3]
  • Clostridium tetani [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Escherichia coli [1]

EM Method

  • Single-particle [5]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [1]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [1]
  • 500-1000 kDa [1]

Release Date

  • 2025 [10]
  • 2024 [3]
  • 2023 [2]
  • 2022 [3]
  • 2021 [4]
  • 2020 [3]

Author by name

  • Junglas BJ [4]
  • Sachse CS [4]
  • Schönnenbeck PS [4]
  • Barbieri S [2]
  • Chen J [2]
  • Chen Y [2]
  • Corti D [2]
  • Grinzato A [2]
  • Huang J [2]
  • Jiang S [2]
  • Kandiah E [2]
  • Lanzavecchia A [2]
  • Leka O [2]
  • Li X [2]
  • Li Y [2]
  • Lin H [2]
  • Liu M [2]
  • Lu H [2]
  • Luan D [2]
  • Ma Y [2]
  • Montecucco C [2]
  • Noble AJ [2]
  • Piccoli L [2]
  • Pirazzini M [2]
  • Schiavo G [2]
  • Shen Y [2]
  • Shen YP [2]
  • Shi ZL [2]
  • Silacci-fregni C [2]
  • Tonellato M [2]
  • Vallese F [2]
  • Wang Q [2]
  • Wang Y [2]
  • Wen Y [2]
  • Wu F [2]
  • Wu K [2]
  • Yan R [2]
  • Yang XL [2]
  • Zanotti G [2]
  • Zhang Y [2]
  • Zhang YY [2]
  • Zhao J [2]
  • Zhou Q [2]
  • Zhu T [2]
  • Barad BA [1]
  • Beumer J [1]
  • Bhabha G [1]
  • Bleazard T [1]
  • Breugem T [1]
  • Camara-wilpert S [1]
  • Carabias A [1]
  • Carragher B [1]
  • Castaño-díez D [1]
  • Choi BS [1]
  • Clevers H [1]
  • Cuppen E [1]
  • Dong L [1]
  • Donnenberg M [1]
  • Donnenberg MS [1]
  • Duimel HQ [1]
  • Elferich JE [1]
  • Evans KV [1]
  • Fellows M [1]
  • Fuentes D [1]
  • Fuglsang A [1]
  • Grigorieff N [1]
  • Grigorieff NG [1]
  • Grotjahn DA [1]
  • Gusach A [1]
  • Haagmans B [1]
  • Harrison PJ [1]
  • Hatton D [1]
  • Hendriks IA [1]
  • Hong SP [1]
  • Hur Y [1]
  • Ishikawa T [1]
  • Jeong YI [1]
  • Ju YS [1]
  • Kelley K [1]
  • Kim HM [1]
  • Kim JH [1]
  • Kim SY [1]
  • Kim T [1]
  • Kim YT [1]
  • Kimanius D [1]
  • Knoops K [1]
  • Koh GY [1]
  • Koopmans M [1]
  • Kuijpers HJH [1]
  • Lamers MM [1]
  • Lee JH [1]
  • Li YN [1]
  • Lippincott-schwartz J [1]
  • Little J [1]
  • Little JI [1]
  • Loerch S [1]
  • Lopéz-méndez B [1]
  • Lucas BA [1]
  • Luk SH [1]
  • Mahbubani KT [1]

Author by ORCID

  • Grinzato A [2]
  • Shi ZL [2]
  • Jiang S [2]
  • Tonellato M [2]
  • Piccoli L [2]
  • Huang J [2]
  • Corti D [2]
  • Zhou Q [2]
  • Shen Y [2]
  • Zhao J [2]
  • Pirazzini M [2]
  • Samso M [1]
  • Little JI [1]
  • Donnenberg MS [1]

Journal

  • BIORXIV [6]
  • STRUCT. [4]
  • STRUCTURE [3]
  • CELL DISCOV [2]
  • ELIFE [2]
  • J CLIN INV [2]
  • MOL CELL [2]
  • PNAS [2]
  • BIOCHEM J [1]
  • BIOCHEMISTRY [1]
  • CELL STEM CELL [1]
  • J STRUCT BIOL [1]
  • PATHOGENS [1]
  • PLOS BIOL [1]
  • SCIENCE [1]
  • THE BIOCHEMICAL JOURNAL [1]

Software

  • RELION [2]

Microscope

  • FEI TITAN KRIOS [4]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [4]
  • OTHER [1]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [2]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • GATAN K3 6K X 4K [1]

EMPIAR Experiment type

  • EXCEPTION [20]

EMPIAR Image category

  • MICROGRAPHS - SINGLE FRAME [12]
  • MICROGRAPHS - MULTIFRAME [11]
  • RECONSTRUCTED VOLUMES [4]
  • STITCHED MAPS [2]
  • TILT SERIES [2]
  • CLASS AVERAGES [1]
  • PICKED PARTICLES - MULTIFRAME - PROCESSED [1]

External links

  • Complex Portal [3]
  • PDB [3]
  • PDBe-Kb [3]
  • UniProt [3]
  • AlphaFold DB [2]
  • ChEBI [1]
  • ChEMBL [1]
  • Gene Ontology [1]
  • InterPro [1]
  • Pfam [1]
Sort by: Download
Showing 1 - 10 of 25. Page 1 of 3
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EMPIAR-12808
Cryo Electron Microscopy of hIAPP and rIAPP fibrils in different aggregation solutions
Release date: Nov. 21, 2025
Dataset size: 737.2 GB
Experiment type: Exception

Valli DV, Maj MM

Biochemistry (2025) [ DOI: 10.1021/acs.biochem.5c00042 ]

Image sets:
  • Extracted particle stacks of co-aggregates formed by human and rat IAPP (hIAPP and rIAPP) at varying ratios and in different buffer conditions.
EMPIAR-13015
Raw micrographs of apoferritin specimen sprayed onto precooled grid coated in liquid ethane
Release date: Oct. 23, 2025
Dataset size: 332.0 GB
Experiment type: Exception

Gusach A, Russo CJ

PNAS (2025) 122 [ DOI: 10.1073/pnas.2516900122 ]

Image sets:
  • Electron counting files for movies used to reconstruct apoferritin
EMPIAR-12523
Cryo electron micrographs of DOPC vesicles after extrusion with a 50 nm filter
Release date: July 3, 2025
Dataset size: 183.7 GB
Experiment type: Exception

Schoennenbeck P, Junglas B, Sachse C

bioRxiv (2025) [ DOI: 10.1101/2025.01.09.632183 ]

Image sets:
  • gain reference
  • Raw movie frames of the "DOPC 50 nm" sample
EMPIAR-12796
CryoEM dataset of Retron-Eco1 E106A filaments
Release date: July 1, 2025
Dataset size: 9.7 TB
Experiment type: Exception

Carabias A, Camara-Wilpert S, Mestre MR, Lopéz-Méndez B, Hendriks IA, Zhao R, Pape T, Fuglsang A, Luk SH, Nielsen ML, Pinilla-Redondo R, Montoya G

Mol Cell (2024) 84 pp. 2185-2202000000000000.0 [ Pubmed: 38788717 DOI: 10.1016/j.molcel.2024.05.001 ]

Image sets:
  • Unaligned multiframe micrographs of Retron-Eco1 E106A mutant
EMD-70296
Download Map
3D View
Cryo-Electron Microscopy of BfpB Reveals a Type IVb Secretin Multimer Sufficient to Accommodate the Exceptionally Wide Bundle-Forming Pilus
Release date: June 18, 2025
Resolution: 4.72 Å
EM Method: Single-particle

Little JI, Singh PK, Samso M, Donnenberg MS

Pathogens (2025) 14 [ Pubmed: 40430791 DOI: doi:10.3390/pathogens14050471 ]

EMPIAR-12175
Cryo-ET dataset of dormant microsporidian spores from Encephalitozoon hellem
Release date: May 22, 2025
Dataset size: 252.1 GB
Experiment type: Exception

Kelley K, Raczkowski AM, Klykov O, Jaroenlak P, Bobe D, Kopylov M, Eng ET, Bhabha G, Potter CS, Carragher B, Noble AJ, Usmani M, Coudray N, Riggi M, Raghu R, Ramchandani H, Bobe D, Kopylov M, Zhong ED, Iwasa JH, Ekiert DC

Proc Natl Acad Sci U S A (2025) 122 [ DOI: 10.1073/pnas.2415233122 Pubmed: 40067903 ]

Image sets:
  • Reconstructed tomograms from microsporidian Encephalitozoon hellem
  • Aligned tilt series from microsporidian Encephalitozoon hellem
EMPIAR-12520
Cryo electron micrographs of DOPC vesicles after sonication
Release date: March 19, 2025
Dataset size: 602.1 GB
Experiment type: Exception

Schönnenbeck PS, Junglas BJ, Sachse CS

Structure ()

Image sets:
  • gain reference
  • Raw movie frames of the "DOPC sonicated" sample
EMPIAR-12521
Cryo electron micrographs of DOPC vesicles after extrusion with a 200 nm filter
Release date: March 19, 2025
Dataset size: 261.9 GB
Experiment type: Exception

Schönnenbeck PS, Junglas BJ, Sachse CS

Structure ()

Image sets:
  • gain reference
  • Raw movie frames of the "DOPC 200 nm" sample
EMPIAR-12522
Cryo electron micrographs of 70% DOPG 30%DPPG vesicles
Release date: March 19, 2025
Dataset size: 285.9 GB
Experiment type: Exception

Schönnenbeck PS, Junglas BJ, Sachse CS

Structure ()

Image sets:
  • gain reference
  • Raw movie frames of the "DOPC 200 nm" sample
EMPIAR-12536
Dataset of apoferritin on HexAuFoil grids
Release date: March 19, 2025
Dataset size: 53.4 GB
Experiment type: Exception

Weckener M

To Be Published

Image sets:
  • Unaligned multi-frame micrographs of apoferritin on HexAuFoil grids
  • Gain reference file for unaligned multi-frame micrographs of apoferritin on HexAuFoil grids
Sort by: Download
Showing 1 - 10 of 25. Page 1 of 3
Display:
Statistics
×

Download











































Preview first 10
Download

Filter By

Current Database

  • EMPIAR [20]
  • EMDB [5]

Current status

  • REL [25]

Sample type

  • Complex [5]
  • Protein [3]
  • Ligand [1]

Organism

  • Homo sapiens [3]
  • Clostridium tetani [2]
  • Severe acute respiratory syndrome coronavirus [2]
  • Escherichia coli [1]

EM Method

  • Single-particle [5]

Resolution

  • ≥ 3Å and < 4Å [3]
  • ≥ 4Å and < 5Å [1]
  • ≥ 8Å and < 12Å [1]

Model molecular weight

  • 50-100 kDa [1]
  • 100-250 kDa [1]
  • 500-1000 kDa [1]

Release Date

  • 2025 [10]
  • 2024 [3]
  • 2023 [2]
  • 2022 [3]
  • 2021 [4]
  • 2020 [3]

Author by name

  • Junglas BJ [4]
  • Sachse CS [4]
  • Schönnenbeck PS [4]
  • Barbieri S [2]
  • Chen J [2]
  • Chen Y [2]
  • Corti D [2]
  • Grinzato A [2]
  • Huang J [2]
  • Jiang S [2]
  • Kandiah E [2]
  • Lanzavecchia A [2]
  • Leka O [2]
  • Li X [2]
  • Li Y [2]
  • Lin H [2]
  • Liu M [2]
  • Lu H [2]
  • Luan D [2]
  • Ma Y [2]
  • Montecucco C [2]
  • Noble AJ [2]
  • Piccoli L [2]
  • Pirazzini M [2]
  • Schiavo G [2]
  • Shen Y [2]
  • Shen YP [2]
  • Shi ZL [2]
  • Silacci-fregni C [2]
  • Tonellato M [2]
  • Vallese F [2]
  • Wang Q [2]
  • Wang Y [2]
  • Wen Y [2]
  • Wu F [2]
  • Wu K [2]
  • Yan R [2]
  • Yang XL [2]
  • Zanotti G [2]
  • Zhang Y [2]
  • Zhang YY [2]
  • Zhao J [2]
  • Zhou Q [2]
  • Zhu T [2]
  • Barad BA [1]
  • Beumer J [1]
  • Bhabha G [1]
  • Bleazard T [1]
  • Breugem T [1]
  • Camara-wilpert S [1]
  • Carabias A [1]
  • Carragher B [1]
  • Castaño-díez D [1]
  • Choi BS [1]
  • Clevers H [1]
  • Cuppen E [1]
  • Dong L [1]
  • Donnenberg M [1]
  • Donnenberg MS [1]
  • Duimel HQ [1]
  • Elferich JE [1]
  • Evans KV [1]
  • Fellows M [1]
  • Fuentes D [1]
  • Fuglsang A [1]
  • Grigorieff N [1]
  • Grigorieff NG [1]
  • Grotjahn DA [1]
  • Gusach A [1]
  • Haagmans B [1]
  • Harrison PJ [1]
  • Hatton D [1]
  • Hendriks IA [1]
  • Hong SP [1]
  • Hur Y [1]
  • Ishikawa T [1]
  • Jeong YI [1]
  • Ju YS [1]
  • Kelley K [1]
  • Kim HM [1]
  • Kim JH [1]
  • Kim SY [1]
  • Kim T [1]
  • Kim YT [1]
  • Kimanius D [1]
  • Knoops K [1]
  • Koh GY [1]
  • Koopmans M [1]
  • Kuijpers HJH [1]
  • Lamers MM [1]
  • Lee JH [1]
  • Li YN [1]
  • Lippincott-schwartz J [1]
  • Little J [1]
  • Little JI [1]
  • Loerch S [1]
  • Lopéz-méndez B [1]
  • Lucas BA [1]
  • Luk SH [1]
  • Mahbubani KT [1]

Author by ORCID

  • Grinzato A [2]
  • Shi ZL [2]
  • Jiang S [2]
  • Tonellato M [2]
  • Piccoli L [2]
  • Huang J [2]
  • Corti D [2]
  • Zhou Q [2]
  • Shen Y [2]
  • Zhao J [2]
  • Pirazzini M [2]
  • Samso M [1]
  • Little JI [1]
  • Donnenberg MS [1]

Journal

  • BIORXIV [6]
  • STRUCT. [4]
  • STRUCTURE [3]
  • CELL DISCOV [2]
  • ELIFE [2]
  • J CLIN INV [2]
  • MOL CELL [2]
  • PNAS [2]
  • BIOCHEM J [1]
  • BIOCHEMISTRY [1]
  • CELL STEM CELL [1]
  • J STRUCT BIOL [1]
  • PATHOGENS [1]
  • PLOS BIOL [1]
  • SCIENCE [1]
  • THE BIOCHEMICAL JOURNAL [1]

Software

  • RELION [2]

Microscope

  • FEI TITAN KRIOS [4]
  • TFS KRIOS [1]

Electron Source

  • FIELD EMISSION GUN [4]
  • OTHER [1]

Film or detector model

  • GATAN K2 SUMMIT 4K X 4K [2]
  • GATAN K3 BIOQUANTUM 6K X 4K [2]
  • GATAN K3 6K X 4K [1]

EMPIAR Experiment type

  • EXCEPTION [20]

EMPIAR Image category

  • MICROGRAPHS - SINGLE FRAME [12]
  • MICROGRAPHS - MULTIFRAME [11]
  • RECONSTRUCTED VOLUMES [4]
  • STITCHED MAPS [2]
  • TILT SERIES [2]
  • CLASS AVERAGES [1]
  • PICKED PARTICLES - MULTIFRAME - PROCESSED [1]

External links

  • Complex Portal [3]
  • PDB [3]
  • PDBe-Kb [3]
  • UniProt [3]
  • AlphaFold DB [2]
  • ChEBI [1]
  • ChEMBL [1]
  • Gene Ontology [1]
  • InterPro [1]
  • Pfam [1]