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COPPER
Filter By
Current Database
- EMDB [13733]
- EMPIAR [9]
Current status
- REL [13742]
Sample type
- Complex [11304]
- Protein [9340]
- Ligand [4912]
- RNA [1269]
- Virus [1130]
- Cellular component [1086]
- DNA [759]
- Cell [327]
- Other [74]
- Tissue [59]
- Sample [17]
Organism
- Homo sapiens [4137]
- Escherichia coli [893]
- Synthetic construct [836]
- Saccharomyces cerevisiae [642]
- Mus musculus [628]
- Severe acute respiratory syndrome coronavirus [515]
- Human immunodeficiency virus 1 [396]
- Oryctolagus cuniculus [368]
- Escherichia coli [354]
- Bos taurus [283]
- Saccharomyces cerevisiae [251]
- Sus scrofa [221]
- Chlamydomonas reinhardtii [167]
- Xenopus laevis [155]
- Enterobacteria phage m13 [139]
- Rattus norvegicus [123]
- Leishmania tarentolae [120]
- Macaca mulatta [119]
- Arabidopsis thaliana [115]
- Mycolicibacterium smegmatis [108]
- Influenza a virus [99]
- Lama glama [81]
- Bacillus subtilis [80]
- Tetrahymena thermophila [77]
- Drosophila melanogaster [65]
- Staphylococcus aureus [55]
- Spinacia oleracea [55]
- Escherichia coli [54]
- Trypanosoma brucei [52]
- Ovis aries [50]
- Enterobacteria phage t4 [48]
- Bacillus subtilis [48]
- Danio rerio [48]
- Gallus gallus [48]
- Zaire ebolavirus [45]
- Staphylococcus phage 812 [45]
- Trichomonas vaginalis [45]
- Chaetomium thermophilum [44]
- Pseudomonas aeruginosa [41]
- Pseudomonas aeruginosa [40]
- Enterovirus d [39]
- Caenorhabditis elegans [38]
- Chaetomium thermophilum [37]
- Mycobacterium tuberculosis [37]
- Mycolicibacterium smegmatis [35]
- Mycobacterium tuberculosis [34]
- Schizosaccharomyces pombe [34]
- Potato virus y [33]
- Euglena gracilis [33]
- Macaca fascicularis [33]
- Lassa mammarenavirus [32]
- Aquifex aeolicus [32]
- Sus scrofa [32]
- Polytomella sp. pringsheim 198.80 [31]
- Neurospora crassa [31]
- Rous sarcoma virus [30]
- Thermus thermophilus [30]
- Parengyodontium album [29]
- Klebsiella pneumoniae [29]
- Human herpesvirus 1 [28]
- Pseudomonas phage jbd30 [28]
- Escherichia coli [28]
- Synechocystis sp. pcc 6803 [27]
- Saccharomyces cerevisiae [27]
- Staphylococcus aureus [27]
- Salmonella enterica [27]
- Candidatus arthromitus sp. sfb-mouse-nl [26]
- Salmonella enterica [26]
- Hepatitis b virus [24]
- Amanita phalloides [24]
- Plasmodium falciparum [23]
- Brassica oleracea [23]
- Caulobacter vibrioides [23]
- Toxoplasma gondii [23]
- Clostridium botulinum [22]
- Clostridioides difficile [22]
- Vibrio alginolyticus [22]
- Severe acute respiratory syndrome coronavirus [21]
- Staphylococcus phage 812k1/420 [21]
- Escherichia coli [21]
- Saccharomyces cerevisiae [21]
- Apis mellifera [21]
- Eastern equine encephalitis virus [20]
- Synechocystis sp. pcc 6803 [20]
- Middle east respiratory syndrome-related coronavirus [20]
- Methylococcus capsulatus [20]
- Rhinovirus b [19]
- Potyvirus atuberosi [19]
- Clostridium perfringens [19]
- Betacoronavirus 1 [19]
- Plasmodium falciparum [19]
- Morbillivirus hominis [19]
- Human immunodeficiency virus 2 [18]
- Escherichia phage ms2 [18]
- Vaccinia virus [17]
- Unidentified adenovirus [17]
- Primate t-lymphotropic virus 1 [17]
- Enterovirus c [17]
- Streptococcus thermophilus [17]
- Streptococcus pyogenes [17]
EM Method
- Single-particle [11239]
- Tomography [844]
- Helical reconstruction [831]
- Subtomogram averaging [738]
- Electron Crystallography [81]
Resolution
- < 2Å [157]
- ≥ 2Å and < 3Å [2796]
- ≥ 3Å and < 4Å [5436]
- ≥ 4Å and < 5Å [1387]
- ≥ 5Å and < 6Å [387]
- ≥ 6Å and < 8Å [688]
- ≥ 8Å and < 12Å [570]
- ≥ 12Å and < 16Å [480]
- ≥ 16Å and < 20Å [253]
- ≥ 20Å and < 30Å [751]
- ≥ 30Å [458]
Model molecular weight
- 0-50 kDa [204]
- 50-100 kDa [480]
- 100-250 kDa [2036]
- 250-500 kDa [1780]
- 500-1000 kDa [1222]
- 1-2 MDa [639]
- 2-5 MDa [698]
- 5-10 MDa [255]
- > 10 MDa [161]
Release Date
- 2026 [1807]
- 2025 [2604]
- 2024 [1901]
- 2023 [1526]
- 2022 [1368]
- 2021 [1093]
- 2020 [1010]
- 2019 [669]
- 2018 [833]
- 2017 [509]
- 2016 [412]
- 2015 [3]
- 2014 [1]
- 2011 [1]
- 2009 [3]
- 2006 [2]
Author by name
- Ward AB [708]
- Liu J [456]
- Ren G [417]
- Zhou L [275]
- Lei D [263]
- Wang Y [251]
- Liu C [237]
- Plevka P [211]
- Cottrell CA [204]
- Wang J [197]
- Zhou ZH [197]
- Jackson AM [193]
- Zhang X [190]
- Han J [189]
- Zhang L [188]
- Ozorowski G [183]
- Zhang Y [181]
- Hu Y [177]
- Rubinstein JL [176]
- Brown A [175]
- Richey ST [174]
- Li Y [171]
- Montefiori DC [166]
- Li S [165]
- Haynes BF [163]
- Li D [157]
- Liu Y [157]
- Fuzik T [156]
- Torres JL [155]
- Rudenko G [152]
- White MA [152]
- Liu JF [151]
- Rodriguez AJ [149]
- Novacek J [148]
- Acharya P [147]
- Turner HL [146]
- Li X [143]
- Sewall LM [143]
- Wilson IA [142]
- Su H [139]
- Wu M [136]
- Xu C [136]
- Engel BD [135]
- Huang C [135]
- Yang Y [135]
- Saunders KO [133]
- Wang H [133]
- Castro C [131]
- Castro CE [131]
- Huang CM [131]
- Marras A [131]
- Marras AE [131]
- Su HJ [131]
- Misra A [130]
- Reddy S [130]
- Edwards RJ [129]
- Raunser S [129]
- Sanders RW [127]
- Zhang S [127]
- Smith J [126]
- Wang L [125]
- Beneke T [123]
- Antanasijevic A [122]
- He Z [122]
- Li H [122]
- Graham BS [121]
- Crispin M [120]
- Doran MH [120]
- Copps J [119]
- Fochler S [119]
- Gluenz E [119]
- Wheeler RJ [119]
- Liu H [118]
- Zhang K [118]
- Han F [117]
- Tian H [116]
- Burton DR [115]
- Janowska K [115]
- Li Z [114]
- Zhang J [114]
- Zhou J [114]
- Chen X [111]
- Reddy MVVVS [111]
- Crowe Jr Je [110]
- Bangaru S [109]
- Plitzko JM [109]
- Hu YQ [108]
- Kwong PD [105]
- Parks R [104]
- Amunts A [103]
- Kuhlbrandt W [103]
- Jiang Y [102]
- Wang X [102]
- Chiu W [100]
- Guo H [100]
- Huang X [100]
- Ranson NA [100]
- Saphire EO [100]
- Letts JA [99]
- Wang Z [99]
Author by ORCID
- Ren G [397]
- Ward AB [342]
- Liu J [284]
- Cottrell CA [203]
- Plevka P [189]
- Brown A [172]
- Zhou ZH [170]
- Lei D [162]
- Fuzik T [156]
- Torres JL [136]
- Rubinstein JL [136]
- White MA [133]
- Zhou L [131]
- Castro CE [131]
- Marras AE [131]
- Su HJ [131]
- Engel BD [129]
- Raunser S [128]
- Beneke T [122]
- Edwards RJ [122]
- Doran MH [119]
- Wheeler RJ [118]
- Gluenz E [118]
- Fochler S [118]
- Zhou L [108]
- Han J [108]
- Crispin M [105]
- Kuhlbrandt W [102]
- Novacek J [102]
- Plitzko JM [99]
- Hu Y [96]
- Wu M [96]
- Hummer G [94]
- Crowe Jr Je [92]
- Allen JD [92]
- Kwong PD [87]
- Amunts A [86]
- Chiu W [86]
- Ozorowski G [86]
- Fort C [84]
- Lei M [80]
- Copps J [80]
- Letts JA [79]
- Xia X [78]
- Ranson NA [78]
- Kanekiyo M [76]
- Pallesen J [76]
- Welsch S [76]
- Pfeffer S [73]
- Itoh Y [73]
- Baker D [73]
- Henderson R [73]
- Boehringer D [72]
- Briggs JAG [72]
- Spahn CMT [71]
- Martynowycz MW [71]
- Dominguez R [71]
- Safarian S [69]
- Perrett HR [68]
- Pantucek R [68]
- Mclellan JS [68]
- Zhou R [67]
- Mielke T [67]
- Sewall LM [67]
- Guo H [65]
- Schief WR [65]
- Waltz F [65]
- Palmer NJ [65]
- Schur FKM [65]
- Teng F [64]
- Yang F [64]
- Zhou J [64]
- Tian H [64]
- Hrebik D [64]
- Yang Y [64]
- Zhang S [64]
- Guo R [64]
- He Z [64]
- Han F [64]
- Mills DJ [63]
- Podobnik M [61]
- Mattei S [61]
- Jackson AM [60]
- Hattne J [60]
- Siborova M [59]
- Leon AN [58]
- Ando N [57]
- Koritnik N [57]
- Kezar A [57]
- Klusch N [57]
- Wrapp D [56]
- Wilson IA [56]
- Bangaru S [55]
- Stahlberg H [54]
- Zhang R [54]
- Saphire EO [53]
- King NP [53]
- Carnathan DG [53]
- Hillen HS [52]
- Grigorieff N [52]
Journal
- NAT COMMUN [2673]
- TO BE PUBLISHED [1249]
- BIORXIV [939]
- PNAS [843]
- NATURE [823]
- NAT STRUCT MOL BIOL [584]
- SCIENCE [540]
- ELIFE [494]
- SCI ADV [470]
- CELL [422]
- MOL CELL [404]
- STRUCTURE [324]
- NUCLEIC ACIDS RES [319]
- CELL REP [275]
- J MOL BIOL [262]
- COMMUN BIOL [258]
- EMBO J [193]
- SCI REP [177]
- J BIOL CHEM [168]
- J VIROL [140]
- PLOS PATHOG [132]
- ACTA CRYSTALLOGR D STRUCT BIOL [122]
- NAT CHEM BIOL [120]
- MBIO [112]
- NAT MICROBIOL [95]
- PROTEIN SCI [84]
- NAT METHODS [68]
- NAT PLANTS [63]
- J STRUCT BIOL [62]
- IMMUNITY [61]
- NPJ VACCINES [60]
- CELL HOST MICROBE [59]
- CELL RES [56]
- J AM CHEM SOC [52]
- FRONT ENDOCRINOL [50]
- PLOS ONE [40]
- SCI TRANSL MED [40]
- EMBO REP [39]
- PLOS BIOL [37]
- J CELL BIOL [35]
- MOL BIOL CELL [34]
- CELL REP METHODS [33]
- LIFE SCI ALLIANCE [33]
- SCI IMMUNOL [33]
- EBIOMEDICINE [32]
- IUCRJ [32]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [31]
- COMMUN CHEM [30]
- PNAS NEXUS [30]
- J STRUCT BIOL X [29]
- VIRUSES [28]
- BLOOD [27]
- INT J MOL SCI [27]
- ISCIENCE [27]
- ADV SCI [25]
- ACS NANO [24]
- J.MOL.CELL.CARDIOL. [23]
- RES SQ [23]
- ANGEW CHEM INT ED ENGL [22]
- BIOMOLECULES [22]
- FRONT MOL BIOSCI [21]
- FEBS J [20]
- DEV CELL [18]
- INT J BIOL MACROMOL [17]
- J.THROMB.HAEMOST. [17]
- PROTEIN CELL [17]
- SMALL [16]
- CELL DEATH DIFFER. [15]
- J BACTERIOL [15]
- NEURON [15]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [14]
- BIOCHEMISTRY [14]
- COMMUN MATER [14]
- BIOCHEM J [13]
- CELL DISCOV [13]
- GENES DEV [13]
- J LIPID RES [13]
- J MED CHEM [13]
- ACTA NEUROPATHOL [11]
- BIOCHIM BIOPHYS ACTA BIOENERG [11]
- CELL REP PHYS SCI [11]
- BIOPHYS J [10]
- FEBS LETT [10]
- FRONT IMMUNOL [10]
- MICROLIFE [10]
- NAT CATAL [10]
- ACS CATAL [9]
- ANTIVIRAL RES [9]
- BIOCHEM BIOPHYS RES COMMUN [9]
- FEBS OPEN BIO [9]
- J CELL SCI [9]
- NAT BIOTECHNOL [9]
- ACS CHEM BIOL [8]
- BIOMACROMOLECULES [8]
- BMC METHODS [8]
- CELL CHEM BIOL [8]
- FRONT MICROBIOL [8]
- J EXP MED [8]
- RNA [8]
- VIROLOGY [8]
Software
- RELION [5708]
- CRYOSPARC [5141]
- CTFFIND [1228]
- GCTF [585]
- IMOD [564]
- WARP [218]
- TOMOCTF [184]
- EMAN2 [166]
- FREALIGN [146]
- UCSF CHIMERAX [143]
- CISTEM [136]
- DYNAMO [132]
- COOT [124]
- PHENIX [117]
- EMAN [115]
- SPIDER [100]
- MATLAB [91]
- PEET [91]
- SPHIRE [82]
- JSPR [81]
- CRYOLO [72]
- AV3 [59]
- TOM TOOLBOX [46]
- ETOMO [44]
- UCSF CHIMERA [44]
- EMCLARITY [43]
- CTFFIND3 [42]
- PYTOM [41]
- CTFPHASEFLIP [38]
- IPET [37]
- CRYODRGN [36]
- IMAGIC [36]
- XMIPP [35]
- STOPGAP [33]
- NOVACTF [32]
- AIMLESS [27]
- AUTO3DEM [26]
- SPARX [25]
- BSOFT [22]
- ISOLDE [21]
- J3DR [21]
- SUBTOM [20]
- JALIGN [19]
- SCIPION [18]
- CTFFIND4 [16]
- TOM [16]
- TOMOALIGN [15]
- TOMO3D [13]
- IHRSR [12]
- REFMAC [12]
- AMIRA [10]
- FREALIX [10]
- PHASER [9]
- EMIRA [8]
- SPRING [8]
- AMIRAFPM [7]
- M [7]
- TOPAZ [7]
- XSCALE [7]
- APPION [6]
- ARETOMO [6]
- CTFIND3 [6]
- XDS [6]
- EMAN2, RELION1.2 [5]
- MOTIONCORR2 [5]
- SHELXD [5]
- CHIMERA [4]
- IMOD/PEET [4]
- MRA/MSA [4]
- PRIISM/IVE [4]
- SCALEPACK [4]
- 3DMOD [3]
- CTFFIND3, LABEL AND SPIDER [3]
- E2CTF.PY [3]
- EMAN1 [3]
- EPU [3]
- GEFREALIGN [3]
- IMIRS [3]
- MOLREP [3]
- MPSA [3]
- POINTLESS [3]
- SIMPLE [3]
- ACE [2]
- CCP4 PACKAGE [2]
- CTFIT [2]
- DEEPEMHANCER [2]
- E2HELIXBOXER [2]
- EAMN [2]
- EMAN BOXER [2]
- GCTF/RELION [2]
- MRC IMAGE PROCESSING PACKAGE [2]
- NAMD [2]
- NOVASTA [2]
- SAMUEL [2]
- SPARX/EMAN2 [2]
- SPIDER, IMAGIC, EMAN [2]
- ACE, CTFFIND3 [1]
- APPION HELIX BOXER [1]
- AUTO [1]
- AUTO3DEM PO2R [1]
Microscope
- FEI TITAN KRIOS [6597]
- TFS KRIOS [3512]
- FEI TALOS ARCTICA [713]
- TFS GLACIOS [544]
- ZEISS LIBRA120PLUS [384]
- FEI TECNAI F20 [345]
- FEI TECNAI SPIRIT [265]
- FEI POLARA 300 [246]
- JEOL CRYO ARM 300 [239]
- FEI TITAN [145]
- FEI TECNAI 20 [115]
- TFS TALOS [99]
- FEI TECNAI ARCTICA [90]
- FEI TECNAI F30 [66]
- FEI TECNAI 12 [50]
- JEOL 3200FSC [47]
- FEI/PHILIPS EM420 [46]
- JEOL CRYO ARM 200 [44]
- TFS TALOS F200C [39]
- JEOL 2200FS [32]
- JEOL 3100FFC [14]
- JEOL 3200FS [13]
- JEOL 2100F [12]
- JEOL 2100 [11]
- JEOL 2010F [9]
- TFS TALOS L120C [9]
- FEI/PHILIPS CM200FEG [8]
- JEOL 2200FSC [8]
- JEOL 3100FEF [5]
- TFS TITAN THEMIS [5]
- HITACHI H3000 UHVEM [4]
- JEOL 1400/HR YPS FEG [4]
- FEI/PHILIPS CM300FEG/T [3]
- JEOL 1200EX [3]
- JEOL 1230 [3]
- JEOL 1400 [3]
- FEI MORGAGNI [2]
- FEI/PHILIPS CM120T [2]
- FEI/PHILIPS CM200FEG/UT [2]
- FEI/PHILIPS CM10 [1]
- FEI/PHILIPS CM300FEG/ST [1]
- HITACHI H-9500SD [1]
- JEOL 100CX [1]
- JEOL 1200EXII [1]
- JEOL 3000SFF [1]
- TFS TUNDRA [1]
Electron Source
- FIELD EMISSION GUN [12851]
- LAB6 [804]
- OTHER [58]
- TUNGSTEN HAIRPIN [20]
Film or detector model
- GATAN K3 6K X 4K [3105]
- GATAN K2 SUMMIT 4K X 4K [2828]
- GATAN K3 BIOQUANTUM 6K X 4K [2337]
- FEI FALCON IV 4K X 4K [1329]
- FEI FALCON III 4K X 4K [1105]
- FEI FALCON II 4K X 4K [531]
- GATAN ULTRASCAN 4000 4K X 4K [510]
- GATAN K2 QUANTUM 4K X 4K [423]
- TFS FALCON 4I 4K X 4K [422]
- TVIPS TEMCAM-F416 4K X 4K [330]
- FEI EAGLE 4K X 4K [198]
- GATAN K3 BIOCONTINUUM 6K X 4K [195]
- FEI CETA 4K X 4K [112]
- OTHER [110]
- DIRECT ELECTRON DE-20 5K X 3K [37]
- GATAN K2 BASE 4K X 4K [32]
- GATAN ULTRASCAN 1000 2K X 2K [24]
- KODAK SO-163 FILM [20]
- FEI FALCON I 4K X 4K [15]
- DIRECT ELECTRON DE-16 4K X 4K [13]
- FEI EAGLE 2K X 2K [10]
- TVIPS TEMCAM-F216 2K X 2K [10]
- TVIPS TEMCAM-F415 4K X 4K [9]
- GATAN MULTISCAN [8]
- DIRECT ELECTRON DE-64 8K X 8K [7]
- GATAN ORIUS SC200 2K X 2K [7]
- GATAN K2 IS 4K X 4K [6]
- DIRECT ELECTRON APOLLO 4K X 4K [5]
- DECTRIS ARINA 0.2K X 0.2K [4]
- DECTRIS SINGLA 1K X 1K [4]
- DIRECT ELECTRON DE-10 5K X 4K [4]
- DIRECT ELECTRON DE-12 4K X 3K [4]
- GATAN K2 4K X 4K [4]
- TVIPS TEMCAM-F224 2K X 2K [4]
- AGFA SCIENTA FILM [2]
- DECTRIS ELA 1K X 0.5K [2]
- SIA 15C 3K X 3K [2]
- TVIPS TEMCAM-F816 8K X 8K [2]
- GATAN ORIUS SC1000 4K X 2.7K [1]
- GATAN ORIUS SC600 2.7K X 2.7K [1]
- KODAK 4489 FILM [1]
EMPIAR Experiment type
- EMDB [9]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [9]
- PICKED PARTICLES - SINGLE FRAME - PROCESSED [1]
External links
- PDB [13006]
- UniProt [7993]
- PDBe-Kb [7359]
- AlphaFold DB [6907]
- InterPro [6003]
- Gene Ontology [5809]
- Pfam [5139]
- ChEBI [4226]
- ChEMBL [3839]
- DrugBank [3431]
- Complex Portal [2169]
- EMPIAR [1576]
- SCOP2 [206]
- CATH [183]
- EMDB [9]
Composite map
CryoEM
Q-score:
0.466
Similar entry percentile: 38%
Similar entry percentile: 38%
Zimmerman MI, Jecrois A
To Be Published
CryoEM
Q-score:
0.453
Similar entry percentile: 46%
Similar entry percentile: 46%
Ragonis-Bachar P, Strati F, Gustavsson E, Khokhlov A, Barnea E, Rayan B, Upchr A, Landau M
To Be Published
CryoEM
Q-score:
0.578
Similar entry percentile: 87%
Similar entry percentile: 87%
Rasmussen A, Hemmelmann N, Bahner J, Hove TT, Flegler VJ, Kraft C, Hedrich R, Rasmussen T, Bottcher B
To Be Published
CryoEM
Q-score:
0.576
Similar entry percentile: 83%
Similar entry percentile: 83%
Rasmussen A, Hemmelmann N, Bahner J, Hove TT, Flegler VJ, Kraft C, Hedrich R, Rasmussen T, Bottcher B
To Be Published
CryoEM
Q-score:
0.585
Similar entry percentile: 62%
Similar entry percentile: 62%
Rasmussen A, Hemmelmann N, Bahner J, Hove TT, Flegler VJ, Kraft C, Hedrich R, Rasmussen T, Bottcher B
To Be Published
CryoEM
Q-score:
0.506
Similar entry percentile: 72%
Similar entry percentile: 72%
Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]
Composite map
CryoEM
Q-score:
0.477
Similar entry percentile: 74%
Similar entry percentile: 74%
Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]
Composite map
CryoEM
Q-score:
0.468
Similar entry percentile: 34%
Similar entry percentile: 34%
Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]
CryoEM
Consensus map
Release date: Aug. 26, 2026
Resolution: 3.2 Å
EM Method: Single-particle
Resolution: 3.2 Å
EM Method: Single-particle
Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]
CryoEM
Focused map
Release date: Aug. 26, 2026
Resolution: 3.4 Å
EM Method: Single-particle
Resolution: 3.4 Å
EM Method: Single-particle
Noguchi Y, Saleh A, Schneider S, Ivanova ME, Chen ZA, Ranjha L, Aramayo R, Tognetti S, Faull SV, Rappsilber J, Speck C
Nat Commun (2026) [ DOI: doi:10.1038/s41467-026-76309-6 ]
Filter By
Current Database
- EMDB [13733]
- EMPIAR [9]
Current status
- REL [13742]
Sample type
- Complex [11304]
- Protein [9340]
- Ligand [4912]
- RNA [1269]
- Virus [1130]
- Cellular component [1086]
- DNA [759]
- Cell [327]
- Other [74]
- Tissue [59]
- Sample [17]
Organism
- Homo sapiens [4137]
- Escherichia coli [893]
- Synthetic construct [836]
- Saccharomyces cerevisiae [642]
- Mus musculus [628]
- Severe acute respiratory syndrome coronavirus [515]
- Human immunodeficiency virus 1 [396]
- Oryctolagus cuniculus [368]
- Escherichia coli [354]
- Bos taurus [283]
- Saccharomyces cerevisiae [251]
- Sus scrofa [221]
- Chlamydomonas reinhardtii [167]
- Xenopus laevis [155]
- Enterobacteria phage m13 [139]
- Rattus norvegicus [123]
- Leishmania tarentolae [120]
- Macaca mulatta [119]
- Arabidopsis thaliana [115]
- Mycolicibacterium smegmatis [108]
- Influenza a virus [99]
- Lama glama [81]
- Bacillus subtilis [80]
- Tetrahymena thermophila [77]
- Drosophila melanogaster [65]
- Staphylococcus aureus [55]
- Spinacia oleracea [55]
- Escherichia coli [54]
- Trypanosoma brucei [52]
- Ovis aries [50]
- Enterobacteria phage t4 [48]
- Bacillus subtilis [48]
- Danio rerio [48]
- Gallus gallus [48]
- Zaire ebolavirus [45]
- Staphylococcus phage 812 [45]
- Trichomonas vaginalis [45]
- Chaetomium thermophilum [44]
- Pseudomonas aeruginosa [41]
- Pseudomonas aeruginosa [40]
- Enterovirus d [39]
- Caenorhabditis elegans [38]
- Chaetomium thermophilum [37]
- Mycobacterium tuberculosis [37]
- Mycolicibacterium smegmatis [35]
- Mycobacterium tuberculosis [34]
- Schizosaccharomyces pombe [34]
- Potato virus y [33]
- Euglena gracilis [33]
- Macaca fascicularis [33]
- Lassa mammarenavirus [32]
- Aquifex aeolicus [32]
- Sus scrofa [32]
- Polytomella sp. pringsheim 198.80 [31]
- Neurospora crassa [31]
- Rous sarcoma virus [30]
- Thermus thermophilus [30]
- Parengyodontium album [29]
- Klebsiella pneumoniae [29]
- Human herpesvirus 1 [28]
- Pseudomonas phage jbd30 [28]
- Escherichia coli [28]
- Synechocystis sp. pcc 6803 [27]
- Saccharomyces cerevisiae [27]
- Staphylococcus aureus [27]
- Salmonella enterica [27]
- Candidatus arthromitus sp. sfb-mouse-nl [26]
- Salmonella enterica [26]
- Hepatitis b virus [24]
- Amanita phalloides [24]
- Plasmodium falciparum [23]
- Brassica oleracea [23]
- Caulobacter vibrioides [23]
- Toxoplasma gondii [23]
- Clostridium botulinum [22]
- Clostridioides difficile [22]
- Vibrio alginolyticus [22]
- Severe acute respiratory syndrome coronavirus [21]
- Staphylococcus phage 812k1/420 [21]
- Escherichia coli [21]
- Saccharomyces cerevisiae [21]
- Apis mellifera [21]
- Eastern equine encephalitis virus [20]
- Synechocystis sp. pcc 6803 [20]
- Middle east respiratory syndrome-related coronavirus [20]
- Methylococcus capsulatus [20]
- Rhinovirus b [19]
- Potyvirus atuberosi [19]
- Clostridium perfringens [19]
- Betacoronavirus 1 [19]
- Plasmodium falciparum [19]
- Morbillivirus hominis [19]
- Human immunodeficiency virus 2 [18]
- Escherichia phage ms2 [18]
- Vaccinia virus [17]
- Unidentified adenovirus [17]
- Primate t-lymphotropic virus 1 [17]
- Enterovirus c [17]
- Streptococcus thermophilus [17]
- Streptococcus pyogenes [17]
EM Method
- Single-particle [11239]
- Tomography [844]
- Helical reconstruction [831]
- Subtomogram averaging [738]
- Electron Crystallography [81]
Resolution
- < 2Å [157]
- ≥ 2Å and < 3Å [2796]
- ≥ 3Å and < 4Å [5436]
- ≥ 4Å and < 5Å [1387]
- ≥ 5Å and < 6Å [387]
- ≥ 6Å and < 8Å [688]
- ≥ 8Å and < 12Å [570]
- ≥ 12Å and < 16Å [480]
- ≥ 16Å and < 20Å [253]
- ≥ 20Å and < 30Å [751]
- ≥ 30Å [458]
Model molecular weight
- 0-50 kDa [204]
- 50-100 kDa [480]
- 100-250 kDa [2036]
- 250-500 kDa [1780]
- 500-1000 kDa [1222]
- 1-2 MDa [639]
- 2-5 MDa [698]
- 5-10 MDa [255]
- > 10 MDa [161]
Release Date
- 2026 [1807]
- 2025 [2604]
- 2024 [1901]
- 2023 [1526]
- 2022 [1368]
- 2021 [1093]
- 2020 [1010]
- 2019 [669]
- 2018 [833]
- 2017 [509]
- 2016 [412]
- 2015 [3]
- 2014 [1]
- 2011 [1]
- 2009 [3]
- 2006 [2]
Author by name
- Ward AB [708]
- Liu J [456]
- Ren G [417]
- Zhou L [275]
- Lei D [263]
- Wang Y [251]
- Liu C [237]
- Plevka P [211]
- Cottrell CA [204]
- Wang J [197]
- Zhou ZH [197]
- Jackson AM [193]
- Zhang X [190]
- Han J [189]
- Zhang L [188]
- Ozorowski G [183]
- Zhang Y [181]
- Hu Y [177]
- Rubinstein JL [176]
- Brown A [175]
- Richey ST [174]
- Li Y [171]
- Montefiori DC [166]
- Li S [165]
- Haynes BF [163]
- Li D [157]
- Liu Y [157]
- Fuzik T [156]
- Torres JL [155]
- Rudenko G [152]
- White MA [152]
- Liu JF [151]
- Rodriguez AJ [149]
- Novacek J [148]
- Acharya P [147]
- Turner HL [146]
- Li X [143]
- Sewall LM [143]
- Wilson IA [142]
- Su H [139]
- Wu M [136]
- Xu C [136]
- Engel BD [135]
- Huang C [135]
- Yang Y [135]
- Saunders KO [133]
- Wang H [133]
- Castro C [131]
- Castro CE [131]
- Huang CM [131]
- Marras A [131]
- Marras AE [131]
- Su HJ [131]
- Misra A [130]
- Reddy S [130]
- Edwards RJ [129]
- Raunser S [129]
- Sanders RW [127]
- Zhang S [127]
- Smith J [126]
- Wang L [125]
- Beneke T [123]
- Antanasijevic A [122]
- He Z [122]
- Li H [122]
- Graham BS [121]
- Crispin M [120]
- Doran MH [120]
- Copps J [119]
- Fochler S [119]
- Gluenz E [119]
- Wheeler RJ [119]
- Liu H [118]
- Zhang K [118]
- Han F [117]
- Tian H [116]
- Burton DR [115]
- Janowska K [115]
- Li Z [114]
- Zhang J [114]
- Zhou J [114]
- Chen X [111]
- Reddy MVVVS [111]
- Crowe Jr Je [110]
- Bangaru S [109]
- Plitzko JM [109]
- Hu YQ [108]
- Kwong PD [105]
- Parks R [104]
- Amunts A [103]
- Kuhlbrandt W [103]
- Jiang Y [102]
- Wang X [102]
- Chiu W [100]
- Guo H [100]
- Huang X [100]
- Ranson NA [100]
- Saphire EO [100]
- Letts JA [99]
- Wang Z [99]
Author by ORCID
- Ren G [397]
- Ward AB [342]
- Liu J [284]
- Cottrell CA [203]
- Plevka P [189]
- Brown A [172]
- Zhou ZH [170]
- Lei D [162]
- Fuzik T [156]
- Torres JL [136]
- Rubinstein JL [136]
- White MA [133]
- Zhou L [131]
- Castro CE [131]
- Marras AE [131]
- Su HJ [131]
- Engel BD [129]
- Raunser S [128]
- Beneke T [122]
- Edwards RJ [122]
- Doran MH [119]
- Wheeler RJ [118]
- Gluenz E [118]
- Fochler S [118]
- Zhou L [108]
- Han J [108]
- Crispin M [105]
- Kuhlbrandt W [102]
- Novacek J [102]
- Plitzko JM [99]
- Hu Y [96]
- Wu M [96]
- Hummer G [94]
- Crowe Jr Je [92]
- Allen JD [92]
- Kwong PD [87]
- Amunts A [86]
- Chiu W [86]
- Ozorowski G [86]
- Fort C [84]
- Lei M [80]
- Copps J [80]
- Letts JA [79]
- Xia X [78]
- Ranson NA [78]
- Kanekiyo M [76]
- Pallesen J [76]
- Welsch S [76]
- Pfeffer S [73]
- Itoh Y [73]
- Baker D [73]
- Henderson R [73]
- Boehringer D [72]
- Briggs JAG [72]
- Spahn CMT [71]
- Martynowycz MW [71]
- Dominguez R [71]
- Safarian S [69]
- Perrett HR [68]
- Pantucek R [68]
- Mclellan JS [68]
- Zhou R [67]
- Mielke T [67]
- Sewall LM [67]
- Guo H [65]
- Schief WR [65]
- Waltz F [65]
- Palmer NJ [65]
- Schur FKM [65]
- Teng F [64]
- Yang F [64]
- Zhou J [64]
- Tian H [64]
- Hrebik D [64]
- Yang Y [64]
- Zhang S [64]
- Guo R [64]
- He Z [64]
- Han F [64]
- Mills DJ [63]
- Podobnik M [61]
- Mattei S [61]
- Jackson AM [60]
- Hattne J [60]
- Siborova M [59]
- Leon AN [58]
- Ando N [57]
- Koritnik N [57]
- Kezar A [57]
- Klusch N [57]
- Wrapp D [56]
- Wilson IA [56]
- Bangaru S [55]
- Stahlberg H [54]
- Zhang R [54]
- Saphire EO [53]
- King NP [53]
- Carnathan DG [53]
- Hillen HS [52]
- Grigorieff N [52]
Journal
- NAT COMMUN [2673]
- TO BE PUBLISHED [1249]
- BIORXIV [939]
- PNAS [843]
- NATURE [823]
- NAT STRUCT MOL BIOL [584]
- SCIENCE [540]
- ELIFE [494]
- SCI ADV [470]
- CELL [422]
- MOL CELL [404]
- STRUCTURE [324]
- NUCLEIC ACIDS RES [319]
- CELL REP [275]
- J MOL BIOL [262]
- COMMUN BIOL [258]
- EMBO J [193]
- SCI REP [177]
- J BIOL CHEM [168]
- J VIROL [140]
- PLOS PATHOG [132]
- ACTA CRYSTALLOGR D STRUCT BIOL [122]
- NAT CHEM BIOL [120]
- MBIO [112]
- NAT MICROBIOL [95]
- PROTEIN SCI [84]
- NAT METHODS [68]
- NAT PLANTS [63]
- J STRUCT BIOL [62]
- IMMUNITY [61]
- NPJ VACCINES [60]
- CELL HOST MICROBE [59]
- CELL RES [56]
- J AM CHEM SOC [52]
- FRONT ENDOCRINOL [50]
- PLOS ONE [40]
- SCI TRANSL MED [40]
- EMBO REP [39]
- PLOS BIOL [37]
- J CELL BIOL [35]
- MOL BIOL CELL [34]
- CELL REP METHODS [33]
- LIFE SCI ALLIANCE [33]
- SCI IMMUNOL [33]
- EBIOMEDICINE [32]
- IUCRJ [32]
- BIOCHIM BIOPHYS ACTA MOL CELL BIOL LIPIDS [31]
- COMMUN CHEM [30]
- PNAS NEXUS [30]
- J STRUCT BIOL X [29]
- VIRUSES [28]
- BLOOD [27]
- INT J MOL SCI [27]
- ISCIENCE [27]
- ADV SCI [25]
- ACS NANO [24]
- J.MOL.CELL.CARDIOL. [23]
- RES SQ [23]
- ANGEW CHEM INT ED ENGL [22]
- BIOMOLECULES [22]
- FRONT MOL BIOSCI [21]
- FEBS J [20]
- DEV CELL [18]
- INT J BIOL MACROMOL [17]
- J.THROMB.HAEMOST. [17]
- PROTEIN CELL [17]
- SMALL [16]
- CELL DEATH DIFFER. [15]
- J BACTERIOL [15]
- NEURON [15]
- ACTA CRYSTALLOGR F STRUCT BIOL COMMUN [14]
- BIOCHEMISTRY [14]
- COMMUN MATER [14]
- BIOCHEM J [13]
- CELL DISCOV [13]
- GENES DEV [13]
- J LIPID RES [13]
- J MED CHEM [13]
- ACTA NEUROPATHOL [11]
- BIOCHIM BIOPHYS ACTA BIOENERG [11]
- CELL REP PHYS SCI [11]
- BIOPHYS J [10]
- FEBS LETT [10]
- FRONT IMMUNOL [10]
- MICROLIFE [10]
- NAT CATAL [10]
- ACS CATAL [9]
- ANTIVIRAL RES [9]
- BIOCHEM BIOPHYS RES COMMUN [9]
- FEBS OPEN BIO [9]
- J CELL SCI [9]
- NAT BIOTECHNOL [9]
- ACS CHEM BIOL [8]
- BIOMACROMOLECULES [8]
- BMC METHODS [8]
- CELL CHEM BIOL [8]
- FRONT MICROBIOL [8]
- J EXP MED [8]
- RNA [8]
- VIROLOGY [8]
Software
- RELION [5708]
- CRYOSPARC [5141]
- CTFFIND [1228]
- GCTF [585]
- IMOD [564]
- WARP [218]
- TOMOCTF [184]
- EMAN2 [166]
- FREALIGN [146]
- UCSF CHIMERAX [143]
- CISTEM [136]
- DYNAMO [132]
- COOT [124]
- PHENIX [117]
- EMAN [115]
- SPIDER [100]
- MATLAB [91]
- PEET [91]
- SPHIRE [82]
- JSPR [81]
- CRYOLO [72]
- AV3 [59]
- TOM TOOLBOX [46]
- ETOMO [44]
- UCSF CHIMERA [44]
- EMCLARITY [43]
- CTFFIND3 [42]
- PYTOM [41]
- CTFPHASEFLIP [38]
- IPET [37]
- CRYODRGN [36]
- IMAGIC [36]
- XMIPP [35]
- STOPGAP [33]
- NOVACTF [32]
- AIMLESS [27]
- AUTO3DEM [26]
- SPARX [25]
- BSOFT [22]
- ISOLDE [21]
- J3DR [21]
- SUBTOM [20]
- JALIGN [19]
- SCIPION [18]
- CTFFIND4 [16]
- TOM [16]
- TOMOALIGN [15]
- TOMO3D [13]
- IHRSR [12]
- REFMAC [12]
- AMIRA [10]
- FREALIX [10]
- PHASER [9]
- EMIRA [8]
- SPRING [8]
- AMIRAFPM [7]
- M [7]
- TOPAZ [7]
- XSCALE [7]
- APPION [6]
- ARETOMO [6]
- CTFIND3 [6]
- XDS [6]
- EMAN2, RELION1.2 [5]
- MOTIONCORR2 [5]
- SHELXD [5]
- CHIMERA [4]
- IMOD/PEET [4]
- MRA/MSA [4]
- PRIISM/IVE [4]
- SCALEPACK [4]
- 3DMOD [3]
- CTFFIND3, LABEL AND SPIDER [3]
- E2CTF.PY [3]
- EMAN1 [3]
- EPU [3]
- GEFREALIGN [3]
- IMIRS [3]
- MOLREP [3]
- MPSA [3]
- POINTLESS [3]
- SIMPLE [3]
- ACE [2]
- CCP4 PACKAGE [2]
- CTFIT [2]
- DEEPEMHANCER [2]
- E2HELIXBOXER [2]
- EAMN [2]
- EMAN BOXER [2]
- GCTF/RELION [2]
- MRC IMAGE PROCESSING PACKAGE [2]
- NAMD [2]
- NOVASTA [2]
- SAMUEL [2]
- SPARX/EMAN2 [2]
- SPIDER, IMAGIC, EMAN [2]
- ACE, CTFFIND3 [1]
- APPION HELIX BOXER [1]
- AUTO [1]
- AUTO3DEM PO2R [1]
Microscope
- FEI TITAN KRIOS [6597]
- TFS KRIOS [3512]
- FEI TALOS ARCTICA [713]
- TFS GLACIOS [544]
- ZEISS LIBRA120PLUS [384]
- FEI TECNAI F20 [345]
- FEI TECNAI SPIRIT [265]
- FEI POLARA 300 [246]
- JEOL CRYO ARM 300 [239]
- FEI TITAN [145]
- FEI TECNAI 20 [115]
- TFS TALOS [99]
- FEI TECNAI ARCTICA [90]
- FEI TECNAI F30 [66]
- FEI TECNAI 12 [50]
- JEOL 3200FSC [47]
- FEI/PHILIPS EM420 [46]
- JEOL CRYO ARM 200 [44]
- TFS TALOS F200C [39]
- JEOL 2200FS [32]
- JEOL 3100FFC [14]
- JEOL 3200FS [13]
- JEOL 2100F [12]
- JEOL 2100 [11]
- JEOL 2010F [9]
- TFS TALOS L120C [9]
- FEI/PHILIPS CM200FEG [8]
- JEOL 2200FSC [8]
- JEOL 3100FEF [5]
- TFS TITAN THEMIS [5]
- HITACHI H3000 UHVEM [4]
- JEOL 1400/HR YPS FEG [4]
- FEI/PHILIPS CM300FEG/T [3]
- JEOL 1200EX [3]
- JEOL 1230 [3]
- JEOL 1400 [3]
- FEI MORGAGNI [2]
- FEI/PHILIPS CM120T [2]
- FEI/PHILIPS CM200FEG/UT [2]
- FEI/PHILIPS CM10 [1]
- FEI/PHILIPS CM300FEG/ST [1]
- HITACHI H-9500SD [1]
- JEOL 100CX [1]
- JEOL 1200EXII [1]
- JEOL 3000SFF [1]
- TFS TUNDRA [1]
Electron Source
- FIELD EMISSION GUN [12851]
- LAB6 [804]
- OTHER [58]
- TUNGSTEN HAIRPIN [20]
Film or detector model
- GATAN K3 6K X 4K [3105]
- GATAN K2 SUMMIT 4K X 4K [2828]
- GATAN K3 BIOQUANTUM 6K X 4K [2337]
- FEI FALCON IV 4K X 4K [1329]
- FEI FALCON III 4K X 4K [1105]
- FEI FALCON II 4K X 4K [531]
- GATAN ULTRASCAN 4000 4K X 4K [510]
- GATAN K2 QUANTUM 4K X 4K [423]
- TFS FALCON 4I 4K X 4K [422]
- TVIPS TEMCAM-F416 4K X 4K [330]
- FEI EAGLE 4K X 4K [198]
- GATAN K3 BIOCONTINUUM 6K X 4K [195]
- FEI CETA 4K X 4K [112]
- OTHER [110]
- DIRECT ELECTRON DE-20 5K X 3K [37]
- GATAN K2 BASE 4K X 4K [32]
- GATAN ULTRASCAN 1000 2K X 2K [24]
- KODAK SO-163 FILM [20]
- FEI FALCON I 4K X 4K [15]
- DIRECT ELECTRON DE-16 4K X 4K [13]
- FEI EAGLE 2K X 2K [10]
- TVIPS TEMCAM-F216 2K X 2K [10]
- TVIPS TEMCAM-F415 4K X 4K [9]
- GATAN MULTISCAN [8]
- DIRECT ELECTRON DE-64 8K X 8K [7]
- GATAN ORIUS SC200 2K X 2K [7]
- GATAN K2 IS 4K X 4K [6]
- DIRECT ELECTRON APOLLO 4K X 4K [5]
- DECTRIS ARINA 0.2K X 0.2K [4]
- DECTRIS SINGLA 1K X 1K [4]
- DIRECT ELECTRON DE-10 5K X 4K [4]
- DIRECT ELECTRON DE-12 4K X 3K [4]
- GATAN K2 4K X 4K [4]
- TVIPS TEMCAM-F224 2K X 2K [4]
- AGFA SCIENTA FILM [2]
- DECTRIS ELA 1K X 0.5K [2]
- SIA 15C 3K X 3K [2]
- TVIPS TEMCAM-F816 8K X 8K [2]
- GATAN ORIUS SC1000 4K X 2.7K [1]
- GATAN ORIUS SC600 2.7K X 2.7K [1]
- KODAK 4489 FILM [1]
EMPIAR Experiment type
- EMDB [9]
EMPIAR Image category
- MICROGRAPHS - MULTIFRAME [9]
- PICKED PARTICLES - SINGLE FRAME - PROCESSED [1]
External links
- PDB [13006]
- UniProt [7993]
- PDBe-Kb [7359]
- AlphaFold DB [6907]
- InterPro [6003]
- Gene Ontology [5809]
- Pfam [5139]
- ChEBI [4226]
- ChEMBL [3839]
- DrugBank [3431]
- Complex Portal [2169]
- EMPIAR [1576]
- SCOP2 [206]
- CATH [183]
- EMDB [9]