EMD-9895

Single-particle
3.7 Å
EMD-9895
3D View Gallery
Deposition: 24/04/2019
Map released: 11/09/2019
Last modified: 25/06/2025
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-9895
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3D volume (map.gz) Experimental metadata (xml) Experimental Metadata (cif.gz)
Map-only Validation report (pdf.gz) Map-only Validation report (cif.gz) Map-only Validation report (xml.gz)
Map and PDB model 6jxr summary report (pdf.gz) Map and 6jxr FULL report (pdf.gz)
EMICSS annotations (xml)

Structure of human T cell receptor-CD3 complex

EMD-9895

Single-particle
3.7 Å
EMD-9895
3D View Gallery
Deposition: 24/04/2019
Map released: 11/09/2019
Last modified: 25/06/2025
Overview 3D View Sample Experiment Validation Additional data Links
Name: complex
Complex [1]
Name: complex
Natural source [1]
Organism: Homo sapiens
Complex Portal [2]
ID Name Overlap
CPX-6482 Alpha-beta T cell receptor complex, TRBC2 variant 0.71
CPX-6581 Alpha-beta T cell receptor complex, TRBC1 variant 0.71
Protein [6]
LEVO
Name: T-cell surface glycoprotein CD3 zeta chain
Number of copies: 2
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Biological process:
cell surface receptor signaling pathway
Molecular function:
transmembrane signaling receptor activity
Natural source
Organism: Homo sapiens
Molecular weight
Experimental Theoretical Method
- 18 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Homo sapiens - - -
LEVO
Name: T-cell surface glycoprotein CD3 delta chain
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Biological process:
cell surface receptor signaling pathway
Molecular function:
transmembrane signaling receptor activity
Natural source
Organism: Homo sapiens
Molecular weight
Experimental Theoretical Method
- 18 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Homo sapiens - - -
LEVO
Name: T-cell surface glycoprotein CD3 epsilon chain
Number of copies: 2
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Biological process:
cell surface receptor signaling pathway
Molecular function:
transmembrane signaling receptor activity
Natural source
Organism: Homo sapiens
Molecular weight
Experimental Theoretical Method
- 23 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Homo sapiens - - -
LEVO
Name: T-cell surface glycoprotein CD3 gamma chain
Number of copies: 1
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [2]
Biological process:
cell surface receptor signaling pathway
Molecular function:
transmembrane signaling receptor activity
Natural source
Organism: Homo sapiens
Molecular weight
Experimental Theoretical Method
- 20 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Homo sapiens - - -
LEVO
Name: T cell receptor alpha variable 12-3,Possible J 11 gene segment,T cell receptor alpha constant
Number of copies: 1
Details: Fusion protein of residues 22-114 from A0A0B4J271, residues 116-132 from A0N4Z6 and residues 134-273 from P01848.
UniProtKB PDBe-KB AlphaFold DB
Domains
Gene Ontology [6]
Biological process:
adaptive immune response T cell receptor signaling pathway alpha-beta T cell activation response to bacterium

Cellular location:
alpha-beta T cell receptor complex plasma membrane
Natural source
Organism: Homo sapiens
Molecular weight
Experimental Theoretical Method
- 28 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Homo sapiens - - -
LEVO
Name: T cell receptor beta variable 6-5,M1-specific T cell receptor beta chain,T cell receptor beta constant 2
Number of copies: 1
Details: Fusion protein of residues 22-112 from A0A0K0K1A5, residues 121-134 from P0DSE2 and residues 135-312 from A0A0G2JMB4.
UniProtKB PDBe-KB
Natural source
Organism: Homo sapiens
Molecular weight
Experimental Theoretical Method
- 32 kDa -
Recombinant Expression
Organism Strain Cell Plasmid
Homo sapiens - - -