EMD-54176

Single-particle
6.25 Å
EMD-54176
3D View Gallery
Deposition: 25/06/2025
Map released: 06/05/2026
Last modified: 06/05/2026
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-54176

Archive Files (Depositor)

Primary 3D volume (map.gz) Half-map 1 Half-map 2 (map.gz) Experimental metadata (xml) Experimental metadata (cif.gz)

Validation (wwPDB)

Map-only validation report (pdf.gz)

EMDB Annotations

EMICSS entry mapping (xml)

EMDB Files

VA raw map (map) VA resolution mask (mrc)

CryoEM structure of the spike S protein trimer of the omicron BA.1 variant prepared in the presence of compound II-Na salt

EMD-54176

Single-particle
6.25 Å
EMD-54176
3D View Gallery
Deposition: 25/06/2025
Map released: 06/05/2026
Last modified: 06/05/2026
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Severe acute respiratory syndrome coronavirus 2
Sample: Spike from OMICRON_GSAS_2P BA.1 variant

Deposition Authors: Llacer JL, Lopez ML
A Tetrapodal Tryptophan Derivative with Multiple Exposed Free Carboxylic Acids Blocks Host Cell Entry of Omicron SARS-Cov-2 and Respiratory Syncytial Virus.
Marti-Mari O, Moreno-Simoni M, Aviles-Alia AI, Rusu L, Forcada-Nadal A, Adhav A, Lopez-Redondo ML, Blazquez AB, Esteban A, Jimenez de Oya N, Marina A, Rubio V, Llacer JL, Gago F, Martin-Acebes MA, Perez-Perez MJ, Geller R, San-Felix A
(2025) Acs Omega , 10 , 56830 - 56844
PUBMED: 41322621
DOI: doi:10.1021/acsomega.5c10442
ISSN: 2470-1343