EMD-47057

Single-particle
2.8 Å
EMD-47057
3D View Gallery
Deposition: 18/09/2024
Map released: 28/05/2025
Last modified: 28/05/2025
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-47057

Archive Files (Depositor)

Primary 3D volume (map.gz) Half-map 1 Half-map 2 (map.gz) Experimental metadata (xml) Experimental metadata (cif.gz)

Validation (wwPDB)

Map-only validation report (pdf.gz) Map-9dns summary report (pdf.gz) Map-9dns FULL report (pdf.gz)

EMDB Annotations

EMICSS entry mapping (xml)

EMDB Files

VA raw map (map) VA resolution mask (mrc)

Cryo-EM structure of Tom1-UBE2D2-ubiquitin complex

EMD-47057

Single-particle
2.8 Å
EMD-47057
3D View Gallery
Deposition: 18/09/2024
Map released: 28/05/2025
Last modified: 28/05/2025
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Saccharomyces cerevisiae, Homo sapiens
Sample: Ternary complex of E3 ubiquitin ligase Tom1 with E2 ubiquitin conjugating enzyme UBE2D2 and ubiquitin
Fitted models: 9dns

Deposition Authors: Warner KM, Hunkeler M, Baek K, Roy Burman SS , Fischer ES
Structural ubiquitin contributes to K48 linkage specificity of the HECT ligase Tom1.
Warner K, Hunkeler M, Baek K, Schmoker A, Roy Burman SS , Overwijn D , Jin C, Donovan KA, Fischer ES
(2025) Cell Rep , 44 , 115688 - 115688
PUBMED: 40359109
DOI: doi:10.1016/j.celrep.2025.115688
ISSN: 2211-1247