EMD-47054

Single-particle
4.0 Å
EMD-47054
3D View Gallery
Deposition: 18/09/2024
Map released: 28/05/2025
Last modified: 28/05/2025
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-47054

Archive Files (Depositor)

Primary 3D volume (map.gz) Half-map 1 Half-map 2 (map.gz) Experimental metadata (xml) Experimental metadata (cif.gz)

Validation (wwPDB)

Map-only validation report (pdf.gz)

EMDB Annotations

EMICSS entry mapping (xml)

EMDB Files

VA raw map (map) VA resolution mask (mrc)

Cryo-EM map of Tom1 ubiquitylation, class 6

EMD-47054

Single-particle
4.0 Å
EMD-47054
3D View Gallery
Deposition: 18/09/2024
Map released: 28/05/2025
Last modified: 28/05/2025
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Saccharomyces cerevisiae, Homo sapiens
Sample: Class 6 Ternary complex of E3 ubiquitin ligase Tom1 with E2 ubiquitin conjugating enzyme UBE2D2 and ubiquitin

Deposition Authors: Warner KM, Hunkeler M, Baek K, Fischer ES
Structural ubiquitin contributes to K48 linkage specificity of the HECT ligase Tom1.
Warner K, Hunkeler M, Baek K, Schmoker A, Roy Burman SS , Overwijn D , Jin C, Donovan KA, Fischer ES
(2025) Cell Rep , 44 , 115688 - 115688
PUBMED: 40359109
DOI: doi:10.1016/j.celrep.2025.115688
ISSN: 2211-1247