EMD-40457
Archive Files (Depositor)
Primary 3D volume (map.gz) Half-map 1 | Half-map 2 (map.gz) Experimental metadata (xml) Experimental metadata (cif.gz)Validation (wwPDB)
Map-only validation report (pdf.gz) Map-8sgj summary report (pdf.gz) Map-8sgj FULL report (pdf.gz)EMDB Annotations
EMICSS entry mapping (xml)EMDB Files
VA raw map (map) VA resolution mask (mrc)Cryo-EM structure of human NCX1 in apo inactivated state
EMD-40457
Single-particle3.1 Å
Deposition: 12/04/2023Map released: 11/10/2023
Last modified: 28/05/2025
| File | Description | Details |
|---|---|---|
| emd_40457_additional_2.map.gz | Focused TM map of human cardiac NCX1 in apo inactivated state | |
| emd_40457_additional_1.map.gz | Focused CBD map of human cardiac NCX1 in apo inactivated state |
×
Additional maps details
File: emd_40457_additional_2.map.gz
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Description: Focused TM map of human cardiac NCX1 in apo inactivated state
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Description: Focused TM map of human cardiac NCX1 in apo inactivated state
⬡ Mask parameters
| X | Y | Z | |
|---|---|---|---|
| Dimensions | 360 | 360 | 360 |
| Origin | 0 | 0 | 0 |
| Spacing | 360 | 360 | 360 |
| Voxel size | 0.83 Å | 0.83 Å | 0.83 Å |
Contour list
| Primary | Level | Source |
|---|---|---|
| True | - | AUTHOR |
⌯ Symmetry
Space group: 1
⿴ Cell
A: 298.8 Å
B: 298.8 Å
C: 298.8 Å
γ: 90.0°
α: 90.0°
β: 90.0°
B: 298.8 Å
C: 298.8 Å
γ: 90.0°
α: 90.0°
β: 90.0°
Map statistics
Minimum: -2.76e+00
Maximum: 4.19e+00
Average: 2.28e-03
Std: 7.49e-02
Maximum: 4.19e+00
Average: 2.28e-03
Std: 7.49e-02
×
Additional maps details
File: emd_40457_additional_1.map.gz
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Description: Focused CBD map of human cardiac NCX1 in apo inactivated state
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Description: Focused CBD map of human cardiac NCX1 in apo inactivated state
⬡ Mask parameters
| X | Y | Z | |
|---|---|---|---|
| Dimensions | 360 | 360 | 360 |
| Origin | 0 | 0 | 0 |
| Spacing | 360 | 360 | 360 |
| Voxel size | 0.83 Å | 0.83 Å | 0.83 Å |
Contour list
| Primary | Level | Source |
|---|---|---|
| True | - | AUTHOR |
⌯ Symmetry
Space group: 1
⿴ Cell
A: 298.8 Å
B: 298.8 Å
C: 298.8 Å
γ: 90.0°
α: 90.0°
β: 90.0°
B: 298.8 Å
C: 298.8 Å
γ: 90.0°
α: 90.0°
β: 90.0°
Map statistics
Minimum: -3.69e+00
Maximum: 4.69e+00
Average: 2.18e-03
Std: 8.38e-02
Maximum: 4.69e+00
Average: 2.18e-03
Std: 8.38e-02
| File | Description | Details |
|---|---|---|
| emd_40457_half_map_2.map.gz | - | |
| emd_40457_half_map_1.map.gz | - |
×
Half maps details
File: emd_40457_half_map_2.map.gz
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
⬡ Half maps parameters
| X | Y | Z | |
|---|---|---|---|
| Dimensions | 360 | 360 | 360 |
| Origin | 0 | 0 | 0 |
| Spacing | 360 | 360 | 360 |
| Voxel size | 0.83 Å | 0.83 Å | 0.83 Å |
Contour list
| Primary | Level | Source |
|---|---|---|
| True | - | AUTHOR |
⌯ Symmetry
Space group: 1
⿴ Cell
A: 298.8 Å
B: 298.8 Å
C: 298.8 Å
γ: 90.0°
α: 90.0°
β: 90.0°
B: 298.8 Å
C: 298.8 Å
γ: 90.0°
α: 90.0°
β: 90.0°
Map statistics
Minimum: -7.38e-01
Maximum: 1.32e+00
Average: 2.15e-03
Std: 9.79e-02
Maximum: 1.32e+00
Average: 2.15e-03
Std: 9.79e-02
×
Half maps details
File: emd_40457_half_map_1.map.gz
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
Format: CCP4
Data type: IMAGE STORED AS FLOATING POINT NUMBER (4 BYTES)
⬡ Half maps parameters
| X | Y | Z | |
|---|---|---|---|
| Dimensions | 360 | 360 | 360 |
| Origin | 0 | 0 | 0 |
| Spacing | 360 | 360 | 360 |
| Voxel size | 0.83 Å | 0.83 Å | 0.83 Å |
Contour list
| Primary | Level | Source |
|---|---|---|
| True | - | AUTHOR |
⌯ Symmetry
Space group: 1
⿴ Cell
A: 298.8 Å
B: 298.8 Å
C: 298.8 Å
γ: 90.0°
α: 90.0°
β: 90.0°
B: 298.8 Å
C: 298.8 Å
γ: 90.0°
α: 90.0°
β: 90.0°
Map statistics
Minimum: -7.88e-01
Maximum: 1.28e+00
Average: 2.15e-03
Std: 9.78e-02
Maximum: 1.28e+00
Average: 2.15e-03
Std: 9.78e-02