EMD-39184

Single-particle
4.9 Å
EMD-39184
3D View Gallery
Deposition: 21/02/2024
Map released: 15/01/2025
Last modified: 30/07/2025
Overview 3D View Sample Experiment Validation Additional data Links
Overview 3D View Sample Experiment Validation Additional data Links

EMD-39184
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3D volume (map.gz) Experimental metadata (xml) Experimental Metadata (cif.gz)
Map-only Validation report (pdf.gz) Map-only Validation report (cif.gz) Map-only Validation report (xml.gz)
Map and PDB model 8ydx summary report (pdf.gz) Map and 8ydx FULL report (pdf.gz)
EMICSS annotations (xml)

Cryo-EM structure of SARS-CoV-2 spike ectodomain (HexaPro, Omicron BA.2 variant) in complex with CeSPIACE

EMD-39184

Single-particle
4.9 Å
EMD-39184
3D View Gallery
Deposition: 21/02/2024
Map released: 15/01/2025
Last modified: 30/07/2025
Overview 3D View Sample Experiment Validation Additional data Links
Sample Organism: Severe acute respiratory syndrome coronavirus 2, synthetic construct
Sample: SARS-CoV-2 spike ectodomain (HexaPro, Omicron BA.2 variant) in complex with CeSPIACE
Fitted models: 8ydx

Deposition Authors: Suzuki H, Nakamura S , Fujiyoshi Y
Structure-guided engineering of a mutation-tolerant inhibitor peptide against variable SARS-CoV-2 spikes.
Nakamura S , Tanimura Y, Nomura R, Suzuki H, Nishikawa K, Kamegawa A , Numoto N , Tanaka A , Kawabata S , Sakaguchi S , Emi A, Suzuki Y , Fujiyoshi Y
(2025) PNAS , 122 , e2413465122 - e2413465122
PUBMED: 39854234
DOI: doi:10.1073/pnas.2413465122
ISSN: 1091-6490
ASTM: PNASA6