CHEBI:16610 - spermidine

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ChEBI Name spermidine
ChEBI ID CHEBI:16610
Definition A triamine that is the 1,5,10-triaza derivative of decane.
Stars This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs CHEBI:26733, CHEBI:45647, CHEBI:15095, CHEBI:9218, CHEBI:15097, CHEBI:26732
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Formula C7H19N3
Net Charge 0
Average Mass 145.24598
Monoisotopic Mass 145.15790
InChI InChI=1S/C7H19N3/c8-4-1-2-6-10-7-3-5-9/h10H,1-9H2
InChIKey ATHGHQPFGPMSJY-UHFFFAOYSA-N
SMILES NCCCCNCCCN
Metabolite of Species Details
Mus musculus (NCBI:txid10090) Source: BioModels - MODEL1507180067 See: PubMed
Escherichia coli (NCBI:txid562) See: PubMed
Roles Classification
Chemical Role(s): Bronsted base
A molecular entity capable of accepting a hydron from a donor (Bronsted acid).
(via organic amino compound )
Biological Role(s): fundamental metabolite
Any metabolite produced by all living cells.
autophagy inducer
Any compound that induces the process of autophagy (the self-digestion of one or more components of a cell through the action of enzymes originating within the same cell).
Application(s): geroprotector
Any compound that supports healthy aging, slows the biological aging process, or extends lifespan.
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ChEBI Ontology
Outgoing spermidine (CHEBI:16610) has role autophagy inducer (CHEBI:138880)
spermidine (CHEBI:16610) has role fundamental metabolite (CHEBI:78675)
spermidine (CHEBI:16610) has role geroprotector (CHEBI:176497)
spermidine (CHEBI:16610) is a polyazaalkane (CHEBI:39474)
spermidine (CHEBI:16610) is a triamine (CHEBI:38751)
spermidine (CHEBI:16610) is conjugate base of spermidine(3+) (CHEBI:57834)
Incoming N-(3-aminopropyl)but-2-ene-1,4-diamine (CHEBI:48008) has functional parent spermidine (CHEBI:16610)
N-[(E)-4-aminobutylidene]propane-1,3-diamine (CHEBI:48007) has functional parent spermidine (CHEBI:16610)
N-caffeoylspermidine (CHEBI:138030) has functional parent spermidine (CHEBI:16610)
N1,N8-bis(caffeoyl)spermidine (CHEBI:138028) has functional parent spermidine (CHEBI:16610)
N1,N8-bis(coumaroyl)spermidine (CHEBI:85530) has functional parent spermidine (CHEBI:16610)
N1,N8-bis(sinapoyl)-spermidine (CHEBI:85300) has functional parent spermidine (CHEBI:16610)
N1,N8-bis-(dihydrocaffeoyl)spermidine (CHEBI:142881) has functional parent spermidine (CHEBI:16610)
N4-aminopropylspermidine (CHEBI:83547) has functional parent spermidine (CHEBI:16610)
N4-bis(aminopropyl)spermidine(1+) (CHEBI:83553) has functional parent spermidine (CHEBI:16610)
acetylspermidine (CHEBI:22204) has functional parent spermidine (CHEBI:16610)
glutathionylspermidine (CHEBI:16613) has functional parent spermidine (CHEBI:16610)
mygalin (CHEBI:64901) has functional parent spermidine (CHEBI:16610)
spermidine alkaloid (CHEBI:38524) has functional parent spermidine (CHEBI:16610)
spermidine hydroxycinnamic acid conjugate (CHEBI:61233) has functional parent spermidine (CHEBI:16610)
trypanothione (CHEBI:17842) has functional parent spermidine (CHEBI:16610)
carboxyspermidine (CHEBI:66868) has parent hydride spermidine (CHEBI:16610)
spermidine(3+) (CHEBI:57834) is conjugate acid of spermidine (CHEBI:16610)
IUPAC Name
N-(3-aminopropyl)butane-1,4-diamine
Synonyms Sources
1,5,10-triazadecane ChemIDplus
4-azaoctamethylenediamine ChemIDplus
4-azaoctane-1,8-diamine IUBMB
N-(3-Aminopropyl)-1,4-butane-diamine KEGG COMPOUND
Spermidin ChEBI
Spermidine KEGG COMPOUND
SPERMIDINE PDBeChem
Manual Xrefs Databases
C00001431 KNApSAcK
C00315 KEGG COMPOUND
DB03566 DrugBank
HMDB0001257 HMDB
LSM-37075 LINCS
SPD PDBeChem
Spermidine Wikipedia
SPERMIDINE MetaCyc
View more database links
Registry Numbers Types Sources
124-20-9 CAS Registry Number KEGG COMPOUND
124-20-9 CAS Registry Number ChemIDplus
1698591 Beilstein Registry Number ChemIDplus
1698591 Reaxys Registry Number Reaxys
454510 Gmelin Registry Number Gmelin
Citations Waiting for Citations Types Sources
1176793 PubMed citation Europe PMC
19801973 PubMed citation Europe PMC
22770225 PubMed citation Europe PMC
30306826 PubMed citation Europe PMC
516181 PubMed citation Europe PMC
6156039 PubMed citation Europe PMC
7350997 PubMed citation Europe PMC
Last Modified
28 October 2021