CHEBI:142164 - 5-(2-aminoethoxy)methyl-2'-deoxyuridine

Main

ChEBI Ontology

Automatic Xrefs

Reactions

Pathways

Models

ChEBI Name 5-(2-aminoethoxy)methyl-2'-deoxyuridine ChEBI ID CHEBI:142164 Definition A pyrimidine 2'-deoxyribonucleoside that is 5-hydroxymethyl-2'-deoxyuridine in which the hydroxymethyl group at position 5 has been formally converted to the corresponding 2-aminoethyl ether. It is a thymidine hypermodification replacing 40% of thymidine nucleotides in the Salmonellaphage ViI. Stars This entity has been manually annotated by the ChEBI Team. Supplier Information Download Molfile XML SDF Find compounds which contain this structure Find compounds which resemble this structure Take structure to the Advanced Search Formula C12H19N3O6 Net Charge 0 Average Mass 301.296 Monoisotopic Mass 301.12739 InChI InChI=1S/C12H19N3O6/c13-1-2-20-6-7-4-15(12(19)14-11(7)18)10-3-8(17)9(5-16)21-10/h4,8-10,16-17H,1-3,5-6,13H2,(H,14,18,19)/t8-,9+,10+/m0/s1 InChIKey YRTWGZACASMEIB-IVZWLZJFSA-N SMILES N1(C(NC(C(=C1)COCCN)=O)=O)[C@H]2C[C@@H]([C@H](O2)CO)O Roles Classification Chemical Role(s): Bronsted base A molecular entity capable of accepting a hydron from a donor (Bronsted acid). (via organic amino compound ) View more via ChEBI Ontology ChEBI Ontology Outgoing 5-(2-aminoethoxy)methyl-2'-deoxyuridine (CHEBI:142164) has functional parent 5-hydroxymethyl-2'-deoxyuridine (CHEBI:61288) 5-(2-aminoethoxy)methyl-2'-deoxyuridine (CHEBI:142164) is a primary amino compound (CHEBI:50994) 5-(2-aminoethoxy)methyl-2'-deoxyuridine (CHEBI:142164) is a pyrimidine 2'-deoxyribonucleoside (CHEBI:19255) IUPAC Name 5-[(2-aminoethoxy)methyl]-2'-deoxyuridine Synonyms Sources 5-(2-aminoethoxymethyl)-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione ChEBI 5-[(2-aminoethoxy)methyl]-1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)tetrahydrofuran-2-yl]pyrimidine-2,4(1H,3H)-dione ChEBI 5-NeOmdU ChEBI Citation Type Source 29555775 PubMed citation Europe PMC Last Modified 10 September 2018