CHEBI:195298 - loganetin

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ChEBI Name loganetin
ChEBI ID CHEBI:195298
Definition An iridoid monoterpenoid that is methyl (4aS,7aR)-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate substituted at positions 1 and 6 by hydroxy groups and at postion 7 by a methyl group; the aglycone of loganin.
Stars This entity has been manually annotated by the ChEBI Team.
Submitter Noemi Tejera
Supplier Information
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Formula C11H16O5
Net Charge 0
Average Mass 228.244
Monoisotopic Mass 228.09977
InChI InChI=1S/C11H16O5/c1-5-8(12)3-6-7(10(13)15-2)4-16-11(14)9(5)6/h4-6,8-9,11-12,14H,3H2,1-2H3/t5-,6+,8-,9+,11+/m0/s1
InChIKey XWOHZIIPBYAMJX-KHBMLBSESA-N
SMILES [H][C@]12C[C@H](O)[C@H](C)[C@@]1([H])[C@H](O)OC=C2C(=O)OC
Metabolite of Species Details
Strychnos nux-blanda (NCBI:txid1037791) Found in Root (BTO:0001188). See: PubMed
Scaevola floribunda (NCBI:txid197961) Found in heartwood (PO:0004512). See: DOI
Calycophyllum sp.uceanum (NCBI:txid271242) Found in bark (BTO:0001301). See: PubMed
Neonauclea reticulata (NCBI:txid2755438) Found in stem (BTO:0001300). See: PubMed
Desfontainia sp.nosa (NCBI:txid34247) Found in leaf (BTO:0000713). See: DOI
Nauclea orientalis (NCBI:txid43526) Found in stem (BTO:0001300). See: PubMed
Lonicera fragrantissima (NCBI:txid486666) Found in flower (BTO:0000469). See: PubMed
Roles Classification
Biological Role(s): plant metabolite
Any eukaryotic metabolite produced during a metabolic reaction in plants, the kingdom that include flowering plants, conifers and other gymnosperms.
antibacterial agent
A substance (or active part thereof) that kills or slows the growth of bacteria.
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ChEBI Ontology
Outgoing loganetin (CHEBI:195298) has role antibacterial agent (CHEBI:33282)
loganetin (CHEBI:195298) has role plant metabolite (CHEBI:76924)
loganetin (CHEBI:195298) is a cyclopentapyran (CHEBI:38606)
loganetin (CHEBI:195298) is a enoate ester (CHEBI:51702)
loganetin (CHEBI:195298) is a iridoid monoterpenoid (CHEBI:50563)
loganetin (CHEBI:195298) is a lactol (CHEBI:38131)
loganetin (CHEBI:195298) is a methyl ester (CHEBI:25248)
loganetin (CHEBI:195298) is a secondary alcohol (CHEBI:35681)
Incoming loganin (CHEBI:15771) has functional parent loganetin (CHEBI:195298)
IUPAC Name
methyl (1R,4aS,6S,7R,7aS)-1,6-dihydroxy-7-methyl-1,4a,5,6,7,7a-hexahydrocyclopenta[c]pyran-4-carboxylate
Manual Xrefs Databases
C00036132 KNApSAcK
C22676 KEGG COMPOUND
CPD-16441 MetaCyc
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Citations Waiting for Citations Types Sources
12943773 PubMed citation Europe PMC
19967996 PubMed citation Europe PMC
21799001 PubMed citation Europe PMC
22466563 PubMed citation Europe PMC
26749820 PubMed citation Europe PMC
27534097 PubMed citation Europe PMC
29276981 PubMed citation Europe PMC
30205569 PubMed citation Europe PMC
30706443 PubMed citation Europe PMC
33098378 PubMed citation Europe PMC
34692636 PubMed citation Europe PMC
37026980 PubMed citation Europe PMC
Last Modified
04 July 2023