oregon green 488 (CHEBI:44777)

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ChEBI Name	oregon green 488

ChEBI ID	CHEBI:44777

Definition	A xanthene dye having two fluoro substituents at the 2- and 7-positions and a 2,4-dicarboxyphenyl group at the 9-position.

Stars	This entity has been manually annotated by the ChEBI Team.

Supplier Information

Download	Molfile XML SDF

Formula

C21H10F2O7

Net Charge

Average Mass

412.29670

Monoisotopic Mass

412.03946

InChI

InChI=1S/C21H10F2O7/c22-13-4-11-17(6-15(13)24)30-18-7-16(25)14(23)5-12(18)19(11)9-2-1-8(20(26)27)3-10(9)21(28)29/h1-7,24H,(H,26,27)(H,28,29)

InChIKey

BRJCLSQFZSHLRL-UHFFFAOYSA-N

SMILES

OC(=O)c1ccc(c(c1)C(O)=O)-c1c2cc(F)c(O)cc2oc2cc(=O)c(F)cc12

Roles Classification
Biological Role(s):	epitope The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.

Application(s):	fluorochrome A fluorescent dye used to stain biological specimens. dye (via xanthene dye )

ChEBI Ontology
Outgoing	oregon green 488 (CHEBI:44777) has functional parent fluorescein (acid form) (CHEBI:172923) oregon green 488 (CHEBI:44777) has role epitope (CHEBI:53000) oregon green 488 (CHEBI:44777) has role fluorochrome (CHEBI:51217) oregon green 488 (CHEBI:44777) is a xanthene dye (CHEBI:37929)

IUPAC Name

4-(2,7-difluoro-6-hydroxy-3-oxo-3H-xanthen-9-yl)benzene-1,3-dicarboxylic acid

Synonyms	Sources
4-(2,7-difluoro-6-hydroxy-3-oxo-3H-xanthen-9-yl)isophthalic acid	IUPAC
4-(2,7-DIFLUORO-6-HYDROXY-3-OXO-3H-XANTHEN-9-YL)ISOPHTHALIC ACID	PDBeChem
oregon green 488 carboxylate	DrugBank
oregon green 488 carboxylic acid	ChEBI

Registry Number	Type	Source
7837365	Reaxys Registry Number	Reaxys

Citation	Type	Source
16195545	PubMed citation	Europe PMC

Last Modified

18 May 2021