Current Composition of Zebrafish UniProt-GOA

Current Composition of Zebrafish GOA



The following table describes the latest version of GOA Zebrafish (version 159), released on 05 December, 2018 and assembled using the publicly released data available in the source databases on 01 December, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 258358 55149
Total Electronic GO annotation 108187 47321
Total Manual GO annotations 150171 26726
Manual GO annotation by UniProt (EBI Curators) 1257 326
Manual GO annotation by UniProt (SIB Curators) 5353 1084
Manual GO annotation by UniProt (PIR Curators) 32 12
Total number of Pubmed references 136587
Number of distinct Pubmed references 5891
Electronic GO annotation using InterPro to GO mapping 39231 21673
Electronic GO annotation using Swiss-Prot keyword to GO mapping 17849 14311
Electronic GO annotation using UniProt Subcellular Location to GO mapping 3914 3215
Electronic GO annotation using EC to GO mapping 1095 871
Electronic GO annotation using projections based on Ensembl orthologs 15 9
Electronic GO annotation using UniPathway to GO mapping 485 456
Electronic GO annotation using UniRule to GO mapping 3969 2638
Electronic GO annotation using RNAcentral Rfam to GO mapping 22021 14523
Logical inferences based on GOC rules and annotations from electronic sources 14269 12509
Manual GO annotation by AgBase 173 38
Manual GO annotation by MGI 35 16
Manual GO annotation by BHF-UCL 117 33
Manual GO annotation by HGNC 44 7
Manual GO annotation by ZFIN 47052 12212
Manual GO annotation by Reactome 2 2
Manual GO annotation by IntAct 94 41
Manual GO annotation by RefGenome 95945 20217
Manual GO annotation by CACAO 34 19
Manual GO annotation by ParkinsonsUK-UCL 1 1
Manual GO annotation by GO_Central 19 7
Manual GO annotation by Complex Portal 13 4
Logical inferences based on GOC rules and annotations from manual sources 5339 4191
Logical inferences based on GOC rules and annotations from manual and electronic sources 19608 15281