Current Composition of Zebrafish UniProt-GOA

Current Composition of Zebrafish GOA



The following table describes the latest version of GOA Zebrafish (version 147), released on 22 November, 2017 and assembled using the publicly released data available in the source databases on 18 November, 2017.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 168668 36441
Total Electronic GO annotation 84759 31732
Total Manual GO annotations 83909 17999
Manual GO annotation by UniProt (EBI Curators) 1272 319
Manual GO annotation by UniProt (SIB Curators) 4818 988
Manual GO annotation by UniProt (PIR Curators) 16 7
Total number of Pubmed references 37226
Number of distinct Pubmed references 5422
Electronic GO annotation using InterPro to GO mapping 45601 22872
Electronic GO annotation using Swiss-Prot keyword to GO mapping 19216 13974
Electronic GO annotation using UniProt Subcellular Location to GO mapping 4474 3818
Electronic GO annotation using EC to GO mapping 1233 1029
Electronic GO annotation using projections based on Ensembl orthologs 18 10
Electronic GO annotation using UniPathway to GO mapping 433 410
Electronic GO annotation using UniRule to GO mapping 3749 2514
Logical inferences based on GOC rules and annotations from electronic sources 7116 4918
Manual GO annotation by AgBase 181 39
Manual GO annotation by MGI 32 14
Manual GO annotation by BHF-UCL 114 31
Manual GO annotation by HGNC 44 7
Manual GO annotation by ZFIN 43855 11606
Manual GO annotation by Reactome 4 4
Manual GO annotation by IntAct 80 35
Manual GO annotation by RefGenome 33440 7875
Manual GO annotation by CACAO 33 18
Manual GO annotation by ParkinsonsUK-UCL 1 1
Manual GO annotation by GO_Central 19 7
Logical inferences based on GOC rules and annotations from manual sources 2919 2336
Logical inferences based on GOC rules and annotations from manual and electronic sources 10035 6507
UniProt-GOA collaborates with

Cardiovascular Gene Ontology Annotation Initiative DictyBase Ensembl Compara Enzyme Nomenclature FlyBase  GO Consortium logo GUDMAP Gramene HAMAP HGNC HPA IntAct InterPro LIFEdb MGI MTBbase logo Reactome RI RGD SGD SwissProt TAIR TIGR WormBase ZFIN The Evidence & Conclusion Ontology