Current Composition of Zebrafish UniProt-GOA

Current Composition of Zebrafish GOA



The following table describes the latest version of GOA Zebrafish (version 149), released on 31 January, 2018 and assembled using the publicly released data available in the source databases on 27 January, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 169826 36546
Total Electronic GO annotation 85864 31915
Total Manual GO annotations 83962 17994
Manual GO annotation by UniProt (EBI Curators) 1284 321
Manual GO annotation by UniProt (SIB Curators) 4906 998
Manual GO annotation by UniProt (PIR Curators) 22 8
Total number of Pubmed references 37212
Number of distinct Pubmed references 5426
Electronic GO annotation using InterPro to GO mapping 46037 23004
Electronic GO annotation using Swiss-Prot keyword to GO mapping 19610 14317
Electronic GO annotation using UniProt Subcellular Location to GO mapping 4496 3827
Electronic GO annotation using EC to GO mapping 1254 1049
Electronic GO annotation using projections based on Ensembl orthologs 18 10
Electronic GO annotation using UniPathway to GO mapping 443 419
Electronic GO annotation using UniRule to GO mapping 3867 2597
Logical inferences based on GOC rules and annotations from electronic sources 7207 5026
Manual GO annotation by AgBase 181 39
Manual GO annotation by MGI 32 14
Manual GO annotation by BHF-UCL 116 32
Manual GO annotation by HGNC 44 7
Manual GO annotation by ZFIN 43830 11599
Manual GO annotation by Reactome 4 4
Manual GO annotation by IntAct 80 35
Manual GO annotation by RefGenome 33409 7875
Manual GO annotation by CACAO 34 19
Manual GO annotation by ParkinsonsUK-UCL 1 1
Manual GO annotation by GO_Central 19 7
Logical inferences based on GOC rules and annotations from manual sources 2932 2345
Logical inferences based on GOC rules and annotations from manual and electronic sources 10139 6593
UniProt-GOA collaborates with

Cardiovascular Gene Ontology Annotation Initiative DictyBase Ensembl Compara Enzyme Nomenclature FlyBase  GO Consortium logo GUDMAP Gramene HAMAP HGNC HPA IntAct InterPro LIFEdb MGI MTBbase logo Reactome RI RGD SGD SwissProt TAIR TIGR WormBase ZFIN The Evidence & Conclusion Ontology