Current Composition of Zebrafish UniProt-GOA

Current Composition of Zebrafish GOA



The following table describes the latest version of GOA Zebrafish (version 152), released on 25 April, 2018 and assembled using the publicly released data available in the source databases on 21 April, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 170187 36908
Total Electronic GO annotation 85439 32255
Total Manual GO annotations 84748 18083
Manual GO annotation by UniProt (EBI Curators) 1288 325
Manual GO annotation by UniProt (SIB Curators) 5013 1015
Manual GO annotation by UniProt (PIR Curators) 22 8
Total number of Pubmed references 38319
Number of distinct Pubmed references 5622
Electronic GO annotation using InterPro to GO mapping 45288 22875
Electronic GO annotation using Swiss-Prot keyword to GO mapping 19997 14723
Electronic GO annotation using UniProt Subcellular Location to GO mapping 4477 3779
Electronic GO annotation using EC to GO mapping 1258 1060
Electronic GO annotation using projections based on Ensembl orthologs 17 9
Electronic GO annotation using UniPathway to GO mapping 452 428
Electronic GO annotation using UniRule to GO mapping 4239 2851
Logical inferences based on GOC rules and annotations from electronic sources 6793 4897
Manual GO annotation by AgBase 181 39
Manual GO annotation by MGI 33 15
Manual GO annotation by BHF-UCL 117 33
Manual GO annotation by HGNC 44 7
Manual GO annotation by ZFIN 44778 11719
Manual GO annotation by Reactome 4 4
Manual GO annotation by IntAct 80 35
Manual GO annotation by RefGenome 33121 7870
Manual GO annotation by CACAO 34 19
Manual GO annotation by ParkinsonsUK-UCL 1 1
Manual GO annotation by GO_Central 19 7
Manual GO annotation by Complex Portal 13 3
Logical inferences based on GOC rules and annotations from manual sources 2918 2358
Logical inferences based on GOC rules and annotations from manual and electronic sources 9711 6463
UniProt-GOA collaborates with

Cardiovascular Gene Ontology Annotation Initiative DictyBase Ensembl Compara Enzyme Nomenclature FlyBase  GO Consortium logo GUDMAP Gramene HAMAP HGNC HPA IntAct InterPro LIFEdb MGI MTBbase logo Reactome RI RGD SGD SwissProt TAIR TIGR WormBase ZFIN The Evidence & Conclusion Ontology