Current Composition of Zebrafish UniProt-GOA

Current Composition of Zebrafish GOA



The following table describes the latest version of GOA Zebrafish (version 157), released on 10 October, 2018 and assembled using the publicly released data available in the source databases on 06 October, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 255019 55063
Total Electronic GO annotation 108516 47306
Total Manual GO annotations 146503 26418
Manual GO annotation by UniProt (EBI Curators) 1261 327
Manual GO annotation by UniProt (SIB Curators) 5220 1060
Manual GO annotation by UniProt (PIR Curators) 22 8
Total number of Pubmed references 132977
Number of distinct Pubmed references 5823
Electronic GO annotation using InterPro to GO mapping 39984 21824
Electronic GO annotation using Swiss-Prot keyword to GO mapping 17893 14313
Electronic GO annotation using UniProt Subcellular Location to GO mapping 3845 3174
Electronic GO annotation using EC to GO mapping 1062 837
Electronic GO annotation using projections based on Ensembl orthologs 18 10
Electronic GO annotation using UniPathway to GO mapping 463 434
Electronic GO annotation using UniRule to GO mapping 3889 2680
Electronic GO annotation using RNAcentral Rfam to GO mapping 22021 14523
Logical inferences based on GOC rules and annotations from electronic sources 14197 12504
Manual GO annotation by AgBase 173 38
Manual GO annotation by MGI 35 16
Manual GO annotation by BHF-UCL 117 33
Manual GO annotation by HGNC 44 7
Manual GO annotation by ZFIN 46740 12164
Manual GO annotation by Reactome 2 2
Manual GO annotation by IntAct 93 40
Manual GO annotation by RefGenome 92732 19705
Manual GO annotation by CACAO 34 19
Manual GO annotation by ParkinsonsUK-UCL 1 1
Manual GO annotation by GO_Central 19 7
Manual GO annotation by Complex Portal 10 3
Logical inferences based on GOC rules and annotations from manual sources 5144 4096
Logical inferences based on GOC rules and annotations from manual and electronic sources 19341 15239