Current Composition of Pig UniProt-GOA

Current Composition of Pig GOA



The following table describes the latest version of GOA Pig (version 87), released on 05 December, 2018 and assembled using the publicly released data available in the source databases on 01 December, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 241302 40632
Total Electronic GO annotation 190579 39180
Total Manual GO annotations 50723 9294
Manual GO annotation by UniProt (EBI Curators) 2974 288
Manual GO annotation by UniProt (SIB Curators) 2827 546
Manual GO annotation by UniProt (PIR Curators) 41 9
Total number of Pubmed references 44286
Number of distinct Pubmed references 352
Electronic GO annotation using InterPro to GO mapping 40938 21371
Electronic GO annotation using Swiss-Prot keyword to GO mapping 19484 13490
Electronic GO annotation using UniProt Subcellular Location to GO mapping 4635 4131
Electronic GO annotation using EC to GO mapping 1436 1187
Electronic GO annotation using projections based on Ensembl orthologs 91395 11110
Electronic GO annotation using UniPathway to GO mapping 410 394
Electronic GO annotation using UniRule to GO mapping 4771 3032
Electronic GO annotation using RNAcentral Rfam to GO mapping 13109 6111
Logical inferences based on GOC rules and annotations from electronic sources 12185 9502
Manual GO annotation by AgBase 1482 269
Manual GO annotation by MGI 17 14
Manual GO annotation by BHF-UCL 278 88
Manual GO annotation by HGNC 75 14
Manual GO annotation by Reactome 12 6
Manual GO annotation by IntAct 47 30
Manual GO annotation by RefGenome 42908 8907
Manual GO annotation by CACAO 13 7
Manual GO annotation by UniProt for Automated Function Prediction SIG 24 11
Manual GO annotation by ParkinsonsUK-UCL 2 1
Manual GO annotation by GO_Central 4 3
Manual GO annotation by ARUK-UCL 7 2
Manual GO annotation by Complex Portal 12 1
Logical inferences based on GOC rules and annotations from manual sources 2216 1873
Logical inferences based on GOC rules and annotations from manual and electronic sources 14401 10328