Current Composition of Pig UniProt-GOA

Current Composition of Pig GOA



The following table describes the latest version of GOA Pig (version 85), released on 10 October, 2018 and assembled using the publicly released data available in the source databases on 06 October, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 238964 40535
Total Electronic GO annotation 189555 39124
Total Manual GO annotations 49409 9125
Manual GO annotation by UniProt (EBI Curators) 2960 284
Manual GO annotation by UniProt (SIB Curators) 2740 539
Manual GO annotation by UniProt (PIR Curators) 41 9
Total number of Pubmed references 43074
Number of distinct Pubmed references 353
Electronic GO annotation using InterPro to GO mapping 41248 21447
Electronic GO annotation using Swiss-Prot keyword to GO mapping 19520 13516
Electronic GO annotation using UniProt Subcellular Location to GO mapping 4600 4114
Electronic GO annotation using EC to GO mapping 1398 1145
Electronic GO annotation using projections based on Ensembl orthologs 90280 11040
Electronic GO annotation using UniPathway to GO mapping 406 390
Electronic GO annotation using UniRule to GO mapping 4752 3058
Electronic GO annotation using RNAcentral Rfam to GO mapping 13109 6111
Logical inferences based on GOC rules and annotations from electronic sources 12080 9493
Manual GO annotation by AgBase 1482 269
Manual GO annotation by MGI 17 14
Manual GO annotation by BHF-UCL 279 88
Manual GO annotation by HGNC 75 14
Manual GO annotation by Reactome 12 6
Manual GO annotation by IntAct 47 30
Manual GO annotation by RefGenome 41694 8730
Manual GO annotation by CACAO 13 7
Manual GO annotation by UniProt for Automated Function Prediction SIG 24 11
Manual GO annotation by ParkinsonsUK-UCL 2 1
Manual GO annotation by GO_Central 4 3
Manual GO annotation by ARUK-UCL 7 2
Manual GO annotation by Complex Portal 12 1
Logical inferences based on GOC rules and annotations from manual sources 2162 1830
Logical inferences based on GOC rules and annotations from manual and electronic sources 14242 10293