Current Composition of Pig UniProt-GOA

Current Composition of Pig GOA



The following table describes the latest version of GOA Pig (version 83), released on 18 July, 2018 and assembled using the publicly released data available in the source databases on 14 July, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 229374 40178
Total Electronic GO annotation 195991 39155
Total Manual GO annotations 33383 6639
Manual GO annotation by UniProt (EBI Curators) 2962 285
Manual GO annotation by UniProt (SIB Curators) 2684 527
Manual GO annotation by UniProt (PIR Curators) 35 8
Total number of Pubmed references 1380
Number of distinct Pubmed references 351
Electronic GO annotation using InterPro to GO mapping 42702 21717
Electronic GO annotation using Swiss-Prot keyword to GO mapping 20102 13830
Electronic GO annotation using UniProt Subcellular Location to GO mapping 4779 4280
Electronic GO annotation using EC to GO mapping 1480 1261
Electronic GO annotation using projections based on Ensembl orthologs 93513 11171
Electronic GO annotation using UniPathway to GO mapping 410 394
Electronic GO annotation using UniRule to GO mapping 5094 3200
Electronic GO annotation using RNAcentral Rfam to GO mapping 13130 6113
Logical inferences based on GOC rules and annotations from electronic sources 13089 10232
Manual GO annotation by AgBase 1579 273
Manual GO annotation by MGI 17 14
Manual GO annotation by BHF-UCL 281 89
Manual GO annotation by HGNC 75 14
Manual GO annotation by Reactome 11 6
Manual GO annotation by IntAct 47 30
Manual GO annotation by RefGenome 25630 5997
Manual GO annotation by CACAO 13 7
Manual GO annotation by UniProt for Automated Function Prediction SIG 24 11
Manual GO annotation by ParkinsonsUK-UCL 2 1
Manual GO annotation by GO_Central 4 3
Manual GO annotation by ARUK-UCL 7 2
Manual GO annotation by Complex Portal 12 1
Logical inferences based on GOC rules and annotations from manual sources 1692 1507
Logical inferences based on GOC rules and annotations from manual and electronic sources 14781 10903