Current Composition of Arabidopsis UniProt-GOA

Current Composition of Arabidopsis GOA



The following table describes the latest version of GOA Arabidopsis (version 153), released on 24 May, 2018 and assembled using the publicly released data available in the source databases on 19 May, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 196789 37442
Total Electronic GO annotation 82765 31369
Total Manual GO annotations 114024 22270
Manual GO annotation by UniProt (EBI Curators) 481 250
Manual GO annotation by UniProt (SIB Curators) 13116 3422
Manual GO annotation by UniProt (PIR Curators) 8 5
Total number of Pubmed references 77160
Number of distinct Pubmed references 10735
Electronic GO annotation using InterPro to GO mapping 25299 14473
Electronic GO annotation using Swiss-Prot keyword to GO mapping 30684 19066
Electronic GO annotation using UniProt Subcellular Location to GO mapping 7076 6354
Electronic GO annotation using EC to GO mapping 2183 1783
Electronic GO annotation using projections based on EnsemblPlants orthologs 148 70
Electronic GO annotation using UniPathway to GO mapping 1651 1561
Electronic GO annotation using UniRule to GO mapping 1972 1257
Electronic GO annotation using RNAcentral Rfam to GO mapping 6011 3085
Logical inferences based on GOC rules and annotations from electronic sources 4372 3227
Manual GO annotation by AgBase 2 2
Manual GO annotation by TAIR 64653 18102
Manual GO annotation by IntAct 6933 1571
Manual GO annotation by RefGenome 27522 8376
Manual GO annotation by CACAO 138 105
Manual GO annotation by UniProt for Automated Function Prediction SIG 738 319
Manual GO annotation by GO_Central 3 2
Manual GO annotation by Complex Portal 430 208
Logical inferences based on GOC rules and annotations from manual sources 3369 2802
Logical inferences based on GOC rules and annotations from manual and electronic sources 7741 5241
UniProt-GOA collaborates with

Cardiovascular Gene Ontology Annotation Initiative DictyBase Ensembl Compara Enzyme Nomenclature FlyBase  GO Consortium logo GUDMAP Gramene HAMAP HGNC HPA IntAct InterPro LIFEdb MGI MTBbase logo Reactome RI RGD SGD SwissProt TAIR TIGR WormBase ZFIN The Evidence & Conclusion Ontology