Current Composition of Arabidopsis UniProt-GOA

Current Composition of Arabidopsis GOA



The following table describes the latest version of GOA Arabidopsis (version 155), released on 18 July, 2018 and assembled using the publicly released data available in the source databases on 14 July, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 197278 37430
Total Electronic GO annotation 83032 31435
Total Manual GO annotations 114246 22161
Manual GO annotation by UniProt (EBI Curators) 481 250
Manual GO annotation by UniProt (SIB Curators) 13436 3462
Manual GO annotation by UniProt (PIR Curators) 9 6
Total number of Pubmed references 77864
Number of distinct Pubmed references 10845
Electronic GO annotation using InterPro to GO mapping 25212 14579
Electronic GO annotation using Swiss-Prot keyword to GO mapping 30547 18988
Electronic GO annotation using UniProt Subcellular Location to GO mapping 7072 6348
Electronic GO annotation using EC to GO mapping 2199 1791
Electronic GO annotation using projections based on EnsemblPlants orthologs 82 43
Electronic GO annotation using UniPathway to GO mapping 1653 1563
Electronic GO annotation using UniRule to GO mapping 2366 1433
Electronic GO annotation using RNAcentral Rfam to GO mapping 6011 3085
Logical inferences based on GOC rules and annotations from electronic sources 4411 3234
Manual GO annotation by AgBase 2 2
Manual GO annotation by TAIR 64574 17834
Manual GO annotation by IntAct 6915 1571
Manual GO annotation by RefGenome 27517 8375
Manual GO annotation by CACAO 138 105
Manual GO annotation by UniProt for Automated Function Prediction SIG 738 319
Manual GO annotation by GO_Central 3 2
Manual GO annotation by Complex Portal 433 209
Logical inferences based on GOC rules and annotations from manual sources 3479 2866
Logical inferences based on GOC rules and annotations from manual and electronic sources 7890 5308