Current Composition of Arabidopsis UniProt-GOA

Current Composition of Arabidopsis GOA



The following table describes the latest version of GOA Arabidopsis (version 159), released on 05 December, 2018 and assembled using the publicly released data available in the source databases on 01 December, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 205244 37620
Total Electronic GO annotation 78791 30943
Total Manual GO annotations 126453 22651
Manual GO annotation by UniProt (EBI Curators) 480 250
Manual GO annotation by UniProt (SIB Curators) 14082 3562
Manual GO annotation by UniProt (PIR Curators) 14 8
Total number of Pubmed references 117682
Number of distinct Pubmed references 11011
Electronic GO annotation using InterPro to GO mapping 25465 14839
Electronic GO annotation using Swiss-Prot keyword to GO mapping 27355 18353
Electronic GO annotation using UniProt Subcellular Location to GO mapping 6701 6052
Electronic GO annotation using EC to GO mapping 1951 1548
Electronic GO annotation using projections based on EnsemblPlants orthologs 110 52
Electronic GO annotation using UniPathway to GO mapping 1652 1563
Electronic GO annotation using UniRule to GO mapping 1730 1154
Electronic GO annotation using RNAcentral Rfam to GO mapping 6010 3085
Logical inferences based on GOC rules and annotations from electronic sources 4308 3181
Manual GO annotation by AgBase 2 2
Manual GO annotation by TAIR 64835 17831
Manual GO annotation by IntAct 7980 1719
Manual GO annotation by RefGenome 37680 11076
Manual GO annotation by CACAO 138 105
Manual GO annotation by UniProt for Automated Function Prediction SIG 738 319
Manual GO annotation by GO_Central 3 2
Manual GO annotation by Complex Portal 501 221
Logical inferences based on GOC rules and annotations from manual sources 3509 2546
Logical inferences based on GOC rules and annotations from manual and electronic sources 7817 4961