Current Composition of Arabidopsis UniProt-GOA

Current Composition of Arabidopsis GOA



The following table describes the latest version of GOA Arabidopsis (version 149), released on 31 January, 2018 and assembled using the publicly released data available in the source databases on 27 January, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 190012 34185
Total Electronic GO annotation 76298 28250
Total Manual GO annotations 113714 22142
Manual GO annotation by UniProt (EBI Curators) 482 250
Manual GO annotation by UniProt (SIB Curators) 12870 3360
Manual GO annotation by UniProt (PIR Curators) 8 5
Total number of Pubmed references 76351
Number of distinct Pubmed references 10635
Electronic GO annotation using InterPro to GO mapping 25475 14530
Electronic GO annotation using Swiss-Prot keyword to GO mapping 30655 19004
Electronic GO annotation using UniProt Subcellular Location to GO mapping 6991 6276
Electronic GO annotation using EC to GO mapping 2169 1765
Electronic GO annotation using projections based on EnsemblPlants orthologs 143 69
Electronic GO annotation using UniPathway to GO mapping 1612 1522
Electronic GO annotation using UniRule to GO mapping 1880 1201
Logical inferences based on GOC rules and annotations from electronic sources 3919 2744
Manual GO annotation by AgBase 2 2
Manual GO annotation by TAIR 64692 18190
Manual GO annotation by IntAct 6882 1560
Manual GO annotation by RefGenome 27899 8383
Manual GO annotation by CACAO 138 105
Manual GO annotation by UniProt for Automated Function Prediction SIG 738 319
Manual GO annotation by GO_Central 3 2
Logical inferences based on GOC rules and annotations from manual sources 3454 2847
Logical inferences based on GOC rules and annotations from manual and electronic sources 7373 4797
UniProt-GOA collaborates with

Cardiovascular Gene Ontology Annotation Initiative DictyBase Ensembl Compara Enzyme Nomenclature FlyBase  GO Consortium logo GUDMAP Gramene HAMAP HGNC HPA IntAct InterPro LIFEdb MGI MTBbase logo Reactome RI RGD SGD SwissProt TAIR TIGR WormBase ZFIN The Evidence & Conclusion Ontology