Current Composition of Arabidopsis UniProt-GOA

Current Composition of Arabidopsis GOA



The following table describes the latest version of GOA Arabidopsis (version 157), released on 10 October, 2018 and assembled using the publicly released data available in the source databases on 06 October, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 203878 37596
Total Electronic GO annotation 79414 30928
Total Manual GO annotations 124464 22489
Manual GO annotation by UniProt (EBI Curators) 481 250
Manual GO annotation by UniProt (SIB Curators) 13972 3543
Manual GO annotation by UniProt (PIR Curators) 9 6
Total number of Pubmed references 115700
Number of distinct Pubmed references 10993
Electronic GO annotation using InterPro to GO mapping 25565 14831
Electronic GO annotation using Swiss-Prot keyword to GO mapping 27377 18286
Electronic GO annotation using UniProt Subcellular Location to GO mapping 6760 6092
Electronic GO annotation using EC to GO mapping 1973 1570
Electronic GO annotation using projections based on EnsemblPlants orthologs 100 42
Electronic GO annotation using UniPathway to GO mapping 1676 1588
Electronic GO annotation using UniRule to GO mapping 2216 1321
Electronic GO annotation using RNAcentral Rfam to GO mapping 6010 3085
Logical inferences based on GOC rules and annotations from electronic sources 4320 3187
Manual GO annotation by AgBase 2 2
Manual GO annotation by TAIR 64835 17832
Manual GO annotation by IntAct 7952 1715
Manual GO annotation by RefGenome 35833 10591
Manual GO annotation by CACAO 138 105
Manual GO annotation by UniProt for Automated Function Prediction SIG 738 319
Manual GO annotation by GO_Central 3 2
Manual GO annotation by Complex Portal 501 221
Logical inferences based on GOC rules and annotations from manual sources 3417 2496
Logical inferences based on GOC rules and annotations from manual and electronic sources 7737 4919