Current Composition of Cow UniProt-GOA

Current Composition of Cow GOA



The following table describes the latest version of GOA Cow (version 147), released on 10 October, 2018 and assembled using the publicly released data available in the source databases on 06 October, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 263291 50821
Total Electronic GO annotation 186259 49367
Total Manual GO annotations 77032 13351
Manual GO annotation by UniProt (EBI Curators) 5621 809
Manual GO annotation by UniProt (SIB Curators) 11585 2337
Manual GO annotation by UniProt (PIR Curators) 56 17
Total number of Pubmed references 59004
Number of distinct Pubmed references 895
Electronic GO annotation using InterPro to GO mapping 15516 9474
Electronic GO annotation using Swiss-Prot keyword to GO mapping 13447 9063
Electronic GO annotation using UniProt Subcellular Location to GO mapping 4952 3919
Electronic GO annotation using EC to GO mapping 836 633
Electronic GO annotation using projections based on Ensembl orthologs 78811 10474
Electronic GO annotation using UniPathway to GO mapping 431 414
Electronic GO annotation using UniRule to GO mapping 1706 1166
Electronic GO annotation using RNAcentral Rfam to GO mapping 36633 29048
Logical inferences based on GOC rules and annotations from electronic sources 30777 29090
Manual GO annotation by Proteome Inc. extracted from Locus Link 2 2
Manual GO annotation by AgBase 2320 427
Manual GO annotation by MGI 56 35
Manual GO annotation by BHF-UCL 245 75
Manual GO annotation by HGNC 125 25
Manual GO annotation by WormBase 28 3
Manual GO annotation by Reactome 574 149
Manual GO annotation by IntAct 299 141
Manual GO annotation by DictyBase 1 1
Manual GO annotation by RefGenome 55776 12169
Manual GO annotation by CACAO 15 11
Manual GO annotation by UniProt for Automated Function Prediction SIG 230 73
Manual GO annotation by ParkinsonsUK-UCL 23 9
Manual GO annotation by GO_Central 21 10
Manual GO annotation by SynGO (UCL Curators) 3 1
Manual GO annotation by ARUK-UCL 15 5
Manual GO annotation by Complex Portal 15 1
Manual GO annotation by SynGO (via Noctua) 22 7
Logical inferences based on GOC rules and annotations from manual sources 3150 2693
Logical inferences based on GOC rules and annotations from manual and electronic sources 33927 29999