Current Composition of Cow UniProt-GOA

Current Composition of Cow GOA



The following table describes the latest version of GOA Cow (version 137), released on 22 November, 2017 and assembled using the publicly released data available in the source databases on 18 November, 2017.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 190303 21658
Total Electronic GO annotation 135673 20658
Total Manual GO annotations 54630 9923
Manual GO annotation by UniProt (EBI Curators) 5589 784
Manual GO annotation by UniProt (SIB Curators) 10604 2179
Manual GO annotation by UniProt (PIR Curators) 43 13
Total number of Pubmed references 3135
Number of distinct Pubmed references 860
Electronic GO annotation using InterPro to GO mapping 17264 9994
Electronic GO annotation using Swiss-Prot keyword to GO mapping 14179 9525
Electronic GO annotation using UniProt Subcellular Location to GO mapping 5409 4300
Electronic GO annotation using EC to GO mapping 1051 803
Electronic GO annotation using projections based on Ensembl orthologs 86844 11388
Electronic GO annotation using UniPathway to GO mapping 435 417
Electronic GO annotation using UniRule to GO mapping 1480 1020
Logical inferences based on GOC rules and annotations from electronic sources 6488 4505
Manual GO annotation by Proteome Inc. extracted from Locus Link 4 3
Manual GO annotation by AgBase 2338 431
Manual GO annotation by MGI 55 34
Manual GO annotation by BHF-UCL 235 71
Manual GO annotation by HGNC 125 25
Manual GO annotation by WormBase 28 3
Manual GO annotation by Reactome 580 149
Manual GO annotation by IntAct 307 144
Manual GO annotation by DictyBase 1 1
Manual GO annotation by RefGenome 34419 8145
Manual GO annotation by CACAO 15 11
Manual GO annotation by UniProt for Automated Function Prediction SIG 231 73
Manual GO annotation by ParkinsonsUK-UCL 23 9
Manual GO annotation by GO_Central 21 10
Manual GO annotation by SynGO (UCL Curators) 3 1
Manual GO annotation by ARUK-UCL 9 2
Logical inferences based on GOC rules and annotations from manual sources 2523 2233
Logical inferences based on GOC rules and annotations from manual and electronic sources 9011 5279
UniProt-GOA collaborates with

Cardiovascular Gene Ontology Annotation Initiative DictyBase Ensembl Compara Enzyme Nomenclature FlyBase  GO Consortium logo GUDMAP Gramene HAMAP HGNC HPA IntAct InterPro LIFEdb MGI MTBbase logo Reactome RI RGD SGD SwissProt TAIR TIGR WormBase ZFIN The Evidence & Conclusion Ontology