Current Composition of Cow UniProt-GOA

Current Composition of Cow GOA



The following table describes the latest version of GOA Cow (version 150), released on 16 January, 2019 and assembled using the publicly released data available in the source databases on 12 January, 2019.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 246576 50663
Total Electronic GO annotation 167419 48760
Total Manual GO annotations 79157 13671
Manual GO annotation by UniProt (EBI Curators) 5628 820
Manual GO annotation by UniProt (SIB Curators) 11924 2392
Manual GO annotation by UniProt (PIR Curators) 63 18
Total number of Pubmed references 60786
Number of distinct Pubmed references 903
Electronic GO annotation using InterPro to GO mapping 16216 9739
Electronic GO annotation using Swiss-Prot keyword to GO mapping 13628 9172
Electronic GO annotation using UniProt Subcellular Location to GO mapping 5001 3949
Electronic GO annotation using EC to GO mapping 827 630
Electronic GO annotation using projections based on Ensembl orthologs 59099 7793
Electronic GO annotation using UniPathway to GO mapping 444 427
Electronic GO annotation using UniRule to GO mapping 1747 1177
Electronic GO annotation using RNAcentral Rfam to GO mapping 36633 29048
Logical inferences based on GOC rules and annotations from electronic sources 30509 28922
Manual GO annotation by Proteome Inc. extracted from Locus Link 2 2
Manual GO annotation by AgBase 2316 427
Manual GO annotation by MGI 56 35
Manual GO annotation by BHF-UCL 245 75
Manual GO annotation by HGNC 125 25
Manual GO annotation by WormBase 28 3
Manual GO annotation by Reactome 576 150
Manual GO annotation by IntAct 299 141
Manual GO annotation by DictyBase 1 1
Manual GO annotation by RefGenome 57543 12531
Manual GO annotation by CACAO 15 11
Manual GO annotation by UniProt for Automated Function Prediction SIG 230 73
Manual GO annotation by ParkinsonsUK-UCL 23 9
Manual GO annotation by GO_Central 25 14
Manual GO annotation by SynGO (UCL Curators) 3 1
Manual GO annotation by ARUK-UCL 15 5
Manual GO annotation by Complex Portal 18 2
Manual GO annotation by SynGO (via Noctua) 22 7
Logical inferences based on GOC rules and annotations from manual sources 3315 2798
Logical inferences based on GOC rules and annotations from manual and electronic sources 33824 29963