Current Composition of Cow UniProt-GOA

Current Composition of Cow GOA



The following table describes the latest version of GOA Cow (version 145), released on 18 July, 2018 and assembled using the publicly released data available in the source databases on 14 July, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 250978 50688
Total Electronic GO annotation 195954 49634
Total Manual GO annotations 55024 9990
Manual GO annotation by UniProt (EBI Curators) 5604 803
Manual GO annotation by UniProt (SIB Curators) 11292 2298
Manual GO annotation by UniProt (PIR Curators) 50 16
Total number of Pubmed references 3223
Number of distinct Pubmed references 891
Electronic GO annotation using InterPro to GO mapping 17122 10034
Electronic GO annotation using Swiss-Prot keyword to GO mapping 13967 9445
Electronic GO annotation using UniProt Subcellular Location to GO mapping 5386 4264
Electronic GO annotation using EC to GO mapping 1054 808
Electronic GO annotation using projections based on Ensembl orthologs 85500 10906
Electronic GO annotation using UniPathway to GO mapping 436 418
Electronic GO annotation using UniRule to GO mapping 1947 1262
Electronic GO annotation using RNAcentral Rfam to GO mapping 36649 29053
Logical inferences based on GOC rules and annotations from electronic sources 31389 29501
Manual GO annotation by Proteome Inc. extracted from Locus Link 4 3
Manual GO annotation by AgBase 2331 431
Manual GO annotation by MGI 55 34
Manual GO annotation by BHF-UCL 246 75
Manual GO annotation by HGNC 125 25
Manual GO annotation by WormBase 28 3
Manual GO annotation by Reactome 574 149
Manual GO annotation by IntAct 299 141
Manual GO annotation by DictyBase 1 1
Manual GO annotation by RefGenome 34082 8140
Manual GO annotation by CACAO 15 11
Manual GO annotation by UniProt for Automated Function Prediction SIG 230 73
Manual GO annotation by ParkinsonsUK-UCL 23 9
Manual GO annotation by GO_Central 21 10
Manual GO annotation by SynGO (UCL Curators) 3 1
Manual GO annotation by ARUK-UCL 15 5
Manual GO annotation by Complex Portal 12 1
Manual GO annotation by SynGO (via Noctua) 14 5
Logical inferences based on GOC rules and annotations from manual sources 2504 2247
Logical inferences based on GOC rules and annotations from manual and electronic sources 33893 30292