Current Composition of Rat UniProt-GOA

Current Composition of Rat GOA



The following table describes the latest version of GOA Rat (version 168), released on 18 July, 2018 and assembled using the publicly released data available in the source databases on 14 July, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 327314 50926
Total Electronic GO annotation 195959 49044
Total Manual GO annotations 131355 14744
Manual GO annotation by UniProt (EBI Curators) 9315 1586
Manual GO annotation by UniProt (SIB Curators) 17037 3081
Manual GO annotation by UniProt (PIR Curators) 77 23
Total number of Pubmed references 66833
Number of distinct Pubmed references 24075
Electronic GO annotation using InterPro to GO mapping 22748 12829
Electronic GO annotation using Swiss-Prot keyword to GO mapping 18888 12373
Electronic GO annotation using UniProt Subcellular Location to GO mapping 7014 5511
Electronic GO annotation using EC to GO mapping 1217 966
Electronic GO annotation using projections based on Ensembl orthologs 79858 10596
Electronic GO annotation using UniPathway to GO mapping 556 534
Electronic GO annotation using UniRule to GO mapping 2342 1541
Electronic GO annotation using RNAcentral Rfam to GO mapping 35038 24010
Logical inferences based on GOC rules and annotations from electronic sources 24658 22371
Manual GO annotation by Proteome Inc. extracted from Locus Link 8 6
Manual GO annotation by AgBase 540 61
Manual GO annotation by MGI 818 386
Manual GO annotation by FB 7 6
Manual GO annotation by RGD 56876 7670
Manual GO annotation by BHF-UCL 2395 485
Manual GO annotation by HGNC 556 148
Manual GO annotation by WormBase 14 11
Manual GO annotation by Reactome 754 275
Manual GO annotation by IntAct 1529 624
Manual GO annotation by DictyBase 1 1
Manual GO annotation by DFLAT 4 3
Manual GO annotation by RefGenome 34553 8513
Manual GO annotation by NTNU_SB 95 30
Manual GO annotation by CACAO 83 60
Manual GO annotation by UniProt for Automated Function Prediction SIG 383 97
Manual GO annotation by ParkinsonsUK-UCL 838 213
Manual GO annotation by Alzheimers Project at University of Toronto 95 5
Manual GO annotation by GO_Central 56 32
Manual GO annotation by SynGO 188 91
Manual GO annotation by SynGO (UCL Curators) 56 27
Manual GO annotation by ARUK-UCL 525 132
Manual GO annotation by Complex Portal 158 26
Manual GO annotation by YuBioLab 253 239
Manual GO annotation by SynGO (via Noctua) 4141 570
Logical inferences based on GOC rules and annotations from manual sources 3640 2881
Logical inferences based on GOC rules and annotations from manual and electronic sources 28298 23438