Current Composition of Rat UniProt-GOA

Current Composition of Rat GOA



The following table describes the latest version of GOA Rat (version 170), released on 10 October, 2018 and assembled using the publicly released data available in the source databases on 06 October, 2018.


GO Annotation Source Number of Associations Number of Distinct Gene Products
Total GOA annotations 345129 51217
Total Electronic GO annotation 189257 48861
Total Manual GO annotations 155872 16680
Manual GO annotation by UniProt (EBI Curators) 9353 1598
Manual GO annotation by UniProt (SIB Curators) 17464 3144
Manual GO annotation by UniProt (PIR Curators) 80 24
Total number of Pubmed references 125406
Number of distinct Pubmed references 24241
Electronic GO annotation using InterPro to GO mapping 21420 12418
Electronic GO annotation using Swiss-Prot keyword to GO mapping 18144 11976
Electronic GO annotation using UniProt Subcellular Location to GO mapping 6613 5204
Electronic GO annotation using EC to GO mapping 1120 873
Electronic GO annotation using projections based on Ensembl orthologs 75799 10268
Electronic GO annotation using UniPathway to GO mapping 553 530
Electronic GO annotation using UniRule to GO mapping 2118 1443
Electronic GO annotation using RNAcentral Rfam to GO mapping 35040 24011
Logical inferences based on GOC rules and annotations from electronic sources 24018 21906
Manual GO annotation by Proteome Inc. extracted from Locus Link 9 6
Manual GO annotation by AgBase 533 57
Manual GO annotation by MGI 824 389
Manual GO annotation by FB 7 6
Manual GO annotation by RGD 56990 7675
Manual GO annotation by BHF-UCL 2391 486
Manual GO annotation by HGNC 555 148
Manual GO annotation by WormBase 14 11
Manual GO annotation by Reactome 795 286
Manual GO annotation by IntAct 1534 625
Manual GO annotation by DictyBase 1 1
Manual GO annotation by DFLAT 4 3
Manual GO annotation by RefGenome 57994 12702
Manual GO annotation by NTNU_SB 95 30
Manual GO annotation by CACAO 83 60
Manual GO annotation by UniProt for Automated Function Prediction SIG 383 97
Manual GO annotation by ParkinsonsUK-UCL 838 213
Manual GO annotation by Alzheimers Project at University of Toronto 95 5
Manual GO annotation by GO_Central 56 32
Manual GO annotation by SynGO 188 91
Manual GO annotation by SynGO (UCL Curators) 56 27
Manual GO annotation by ARUK-UCL 594 146
Manual GO annotation by Complex Portal 268 44
Manual GO annotation by YuBioLab 253 238
Manual GO annotation by SynGO (via Noctua) 4415 600
Logical inferences based on GOC rules and annotations from manual sources 4432 3262
Logical inferences based on GOC rules and annotations from manual and electronic sources 28450 23146