Round 50

Registration is closed Participant list

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Announcement

 

We are happy to announce CAPRI Round 50, representing 4th common CASP-CAPRI Assembly Prediction challenge, run as part of the CASP14 prediction challenge.

The CASP14 season will open May 18 and run until approximately July 30, 2020. The first assembly target will be offered during the week of May 25.  Members of both the CASP and CAPRI communities will be invited to model the interfaces of protein hetero-complexes, homo-multimers and domain-domain interactions in CASP14 assembly targets. Description of the CASP14 experiment can be found at: http://predictioncenter.org/casp14/index.cgi

CAPRI participants wishing to take part in Round 50 are invited to register for the entire round in advance. As in previous joint experiments we require CAPRI participants to register also with the CASP14 season. Only groups registered with both experiments will be part of the joint CASP-CAPRI experiment (for further details please consult the CASP-CAPRI page using the link on the top menu).

Round 50 targets will be announced as soon as they become available from CASP.  As in previous CASP-CAPRI Rounds, the number or type of targets offered in this Round are currently unknown, as targets are being submitted piecemeal during the entire duration of the CASP14 session. Decision on targets designated for CAPRI docking and scoring predictions (only a subset of the CASP14 targets prediction is expected to represent appropriate CAPRI targets), will be made by CAPRI MC members (Shoshana Wodak and Marc Lensink), and communicated to CASP. These targets will be earmarked as such in the CASP target list.

Target information: Information on the different targets and CAPRI submission deadlines (for servers, predictors and scorer) will be provided by CAPRI as usual. Target information can also be obtained from CASP (CASP prediction website)

 

Model submission: To ensure that submitted models strictly adhere to the standard format and residue numbering, a template with the required submission format will be provided for each target by the CAPRI system. Predictor, uploader and scorer groups must all use this template.  Predictors and servers are expected to submit 100 models for each target and rank their 10 best models in order of decreasing model quality.  All submitted models will be checked for consistency with the formats of both CASP and CAPRI by the CAPRI system, and non-compliant submissions will be refused.  The top 5 models of each submission will be forwarded to CASP. For further details and tips, visit the CASP-CAPRI page.  Only models submitted through the CAPRI system will be considered for the scoring experiment.

Model evaluation: All the submitted models (to CAPRI or CASP) of homo- and hetero-complexes on CAPRI-selected targets, will be evaluated by the CAPRI evaluation team as usual.  The top 5 models submitted by CAPRI participants will also be evaluated by the CASP independent evaluation team. The CASP and CAPRI assessor teams will meet to discuss how the evaluation results will be published in the CASP14 Special Issue.

 

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Results

The result for Round 50 can be downloaded via this link: Download

 

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Targets

Dates

Registration starts: May 4, 2020, midnight

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