Structure for PPACK (S01.217 inhibitor)
 
| PDB | Organism | Resolution | Comment |
|---|---|---|---|
| 1ABJ | Homo sapiens | 2.40 Å | complex with D-Phe-Pro-Arg chloromethylketone |
| Catalytic residues are shown in ball-and-stick representation: His406 in purple, Asp462 in pink and Ser568 in orange. The N-terminal light chain is shown in yellow. D-Phe-Pro-Arg-chloromethane is shown in grey in ball-and-stick representation. | |||
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| TERTIARY STRUCTURE DATA | ||||||||
|---|---|---|---|---|---|---|---|---|
| Comment | Resolution | PDB | PDBe | SCOP | CATH | PDBSum | Proteopedia | Reference |
| thrombin ( Homo sapiens) | ||||||||
| complex with D-Phe-Pro-Arg chloromethylketone | 2.40 Å | 1ABJ | 1ABJ | 1ABJ | 1ABJ | 1ABJ | 1ABJ | Qiu et al., 1992 |
| complex with hirugen and phenylmethylenecarboxy-(methyleneamino-formyl-diphenylmethyl)methy-pro-boroval | 2.10 Å | 1AIX | 1AIX | 1AIX | 1AIX | 1AIX | 1AIX | Bode et al., 1992 |
| alpha-thrombin; complex with des-Asp55 hirudin and D-Phe-Pro-Arg-chloromethylketone | 3.00 Å | 1DWE | 1DWE | 1DWE | 1DWE | 1DWE | 1DWE | Banner & Hadvary, 1991 |
| fast form mutant Arg77Ala; complex with PPACK | 1.91 Å | 1SFQ | 1SFQ | 1SFQ | 1SFQ | 1SFQ | 1SFQ | |
| slow form; complex with PPACK | 1.55 Å | 1SHH | 1SHH | 1SHH | 1SHH | 1SHH | 1SHH | |
| anticoagulant mutant Trp215Ala/Glu217Ala; complex with PPACK | 2.40 Å | 1TQ7 | 1TQ7 | 1TQ7 | 1TQ7 | 1TQ7 | 1TQ7 | |
| Gly193Ala mutant; complex with PPACK | 2.00 Å | 1Z8I | 1Z8I | 1Z8I | 1Z8I | 1Z8I | 1Z8I | |
| Cys191Ala-Cys220Ala mutant; complex with the inhibitor PPACK | 1.80 Å | 2PGQ | 2PGQ | 2PGQ | 2PGQ | 2PGQ | 2PGQ | |
| Ser195Thr mutant; complex with PPACK | 1.84 Å | 4RKO | 4RKO | 4RKO | 4RKO | 4RKO | 4RKO | |
| coagulation factor IXa ( Homo sapiens) | ||||||||
| Lys98Thr variant; complex with PPACK | 1.30 Å | 5JB9 | 5JB9 | 5JB9 | 5JB9 | 5JB9 | 5JB9 | |
| Val16Ile/Lys98Thr/Tyr177Thr/Ile212Val variant; complex with PPACK | 1.40 Å | 5JBA | 5JBA | 5JBA | 5JBA | 5JBA | 5JBA | |
| Val16Ile/Lys98Thr/Tyr177Thr/Ile213val variant; complex with PPACK | 1.90 Å | 5JBC | 5JBC | 5JBC | 5JBC | 5JBC | 5JBC | |
| thrombin ( Homo sapiens) | ||||||||
| Trp215Ala/Glu217Ala mutant fused to EGF456 of thrombomodulin via a 31-residue linker; complex with PPACK | 2.34 Å | 5TO3 | 5TO3 | 5TO3 | 5TO3 | 5TO3 | 5TO3 | |


