EMDB Validation Analysis : EMD-30210

EMD-30210 › Validation analysis

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The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP)

Validation summary

Resolution:
Method:
Map released:
Last modified:
Sample name:
2.5 Å (depositor provided) (FSC 0.143 CUT-OFF)
Single particle reconstruction
2020-04-22
2021-03-10
The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP)
Organism:
Fitted atomic model:
SARS bat coronavirus
7bv2 (5 chains, 8471 atoms)

Model evaluation bars:

Model Metric Evaluation bar Average value
7bv2 Q-score
0.607
Atom Inclusion
0.817
CCC
0.831
SMOC
0.607

Additional validation information

Please find validation analyses used for peer review in the wwPDB validation reports for this entries map (EMD-30210) and model-map (7bv2 and EMD-30210). Validation analysis of this entry is available in the main page. Documentation for the outputs of EMDB Validation Analysis can be found on the help page.

Map parameters

Recommended contour level:
Number of grid points:
Voxel size:
Minimum value:
Maximum value:
Average value:
Standard deviation:
0.058
192 × 192 × 192
1.014 × 1.014 × 1.014 Å
-0.312
0.461
-0.000
0.014
Image not available

Primary map visualisation

Projections
Volume graphs
Download: EMDB Mask Learn more EMDB Raw Map Learn more Depositor Half Map 1 Depositor Half Map 2

Map and 1 fitted model

Map with model 7bv2 (The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP))
Primary map with model views
Title
X projection

X

Y projection

Y

Z projection

Z

Map-model fit plots
Chain scores summary
Strudel Information
Chain:
Score range:
Symmetry Information
No rotational symmetry has been detected in this map.