EMDB Validation Analysis : EMD-6844

EMD-6844 › Validation analysis

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Cofilin decorated actin filament

Validation summary

Resolution:
Method:
Map released:
Last modified:
Sample name:
3.8 Å (depositor provided) (FSC 0.143 CUT-OFF)
Helical reconstruction
2018-05-23
2024-03-27
Cofilin-decorated actin filament
Organism:
Fitted atomic model:
Gallus gallus
5yu8 (8 chains, 17822 atoms)

Model evaluation bars:

Model Metric Evaluation bar Average value
5yu8 Q-score
0.471
Atom Inclusion
0.638
CCC
0.844
SMOC
0.635

Additional validation information

Please find validation analyses used for peer review in the wwPDB validation reports for this entries map (EMD-6844) and model-map (5yu8 and EMD-6844). Validation analysis of this entry is available in the main page. Documentation for the outputs of EMDB Validation Analysis can be found on the help page.

Map parameters

Recommended contour level:
Number of grid points:
Voxel size:
Minimum value:
Maximum value:
Average value:
Standard deviation:
0.1371
320 × 320 × 320
1.080 × 1.080 × 1.080 Å
-0.487
0.727
0.001
0.023
Image not available

Primary map visualisation

Projections
Volume graphs
Download: EMDB Mask Learn more EMDB Raw Map Learn more Depositor Half Map 1 Depositor Half Map 2
Provided FSC(Å)
FSC 0.143 3.75
FSC 0.5 4.03
FSC half-bit -

Map and 1 fitted model

Map with model 5yu8 (Cofilin decorated actin filament)
Primary map with model views
Title
X projection

X

Y projection

Y

Z projection

Z

Map-model fit plots
Chain scores summary
Strudel Information
Chain:
Score range:
Symmetry Information
No rotational symmetry has been detected in this map.