ArrayExpress interface now retired

After more than 20 years in action, on 30 September 2022 the ArrayExpress interface was retired. All datasets have now been migrated into the BioStudies ArrayExpress collection.
ArrayExpress logo; a red A and green E in a circle with the word ArrayExpress
ArrayExpress logo

From 30 September:

  • New data will only be added to the BioStudies ArrayExpress collection of functional genomics data

What this means for you:

  • If you wish to submit functional genomics data to EMBL-EBI, please activate your BioStudies account to view your private data and get links for reviewers. From 30 September 2022, you can also use this account to do post-submission changes (i.e. update release dates or add publication records).
    Note that Annotare will continue to serve as the submission tool, no change here. 
  • If you are using the ArrayExpress API for programmatic access, update your processes to use the new endpoints.

Please send any questions or feedback to arrayexpress@ebi.ac.uk

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Tags: bioinformatics, data service, embl-ebi, FAIR data, functional genomics, gene expression, genomics, open data,