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Echovirus3 full particle in complex with 6D10 Fab
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8gsd
Q-score: 0.556
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ DOI: doi:10.3390/v14112322 Pubmed: 36366420 ]
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Genome polyprotein (fragment) (7 kDa, Protein from Echovirus E3)
- 6d10 fab (Complex from Mus musculus)
- Echovirus e3 (Virus from Echovirus E3)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Echovirus3 full particle in complex with 6d10 fab (Complex)
- Genome polyprotein (fragment) (32 kDa, Protein from Echovirus E3)
- Genome polyprotein (26 kDa, Protein from Echovirus E3)
- Sphingosine (299 Da, Ligand)
- Genome polyprotein (29 kDa, Protein from Echovirus E3)
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 7x47
Q-score: 0.474
Zheng Q, Zhu R, Yin Z, Xu L, Sun H, Yu H, Wu Y, Jiang Y, Huang Q, Huang Y, Zhang D, Liu L, Yang H, He M, Zhou Z, Jiang Y, Chen Z, Zhao H, Que Y, Kong Z, Zhou L, Li T, Zhang J, Luo W, Gu Y, Cheng T, Li S, Xia N
Cell Host Microbe (2022) 30 pp. 1279-1294.e6 [ DOI: doi:10.1016/j.chom.2022.08.001 Pubmed: 36002016 ]
- 2e6 light chain (11 kDa, Protein from Mus musculus)
- Virion protein 1 (31 kDa, Protein from Coxsackievirus B1)
- Vp2 (29 kDa, Protein from Coxsackievirus B1)
- 2e6 heavy chain (13 kDa, Protein from Mus musculus)
- Cryo-em structure of coxsackievirus b1 empty particle in complex with nab 2e6 (classified from cvb1 mature virion in complex with 8a10 and 2e6) (Complex from Coxsackievirus B1)
- Genome polyprotein (26 kDa, Protein from Coxsackievirus B1)
Resolution: 3.82 Å
EM Method: Single-particle
Fitted PDBs: 7x4k
Q-score: 0.465
Zheng Q, Zhu R, Yin Z, Xu L, Sun H, Yu H, Wu Y, Jiang Y, Huang Q, Huang Y, Zhang D, Liu L, Yang H, He M, Zhou Z, Jiang Y, Chen Z, Zhao H, Que Y, Kong Z, Zhou L, Li T, Zhang J, Luo W, Gu Y, Cheng T, Li S, Xia N
Cell Host Microbe (2022) 30 pp. 1279-1294.e6 [ DOI: doi:10.1016/j.chom.2022.08.001 Pubmed: 36002016 ]
- Cryo-em structure of coxsackievirus b1 empty particle in complex with nab 9a3 (classified from cvb1 mature virion in complex with 8a10 and 9a3) (Complex from Coxsackievirus B1)
- Vp3 (26 kDa, Protein from Coxsackievirus B1)
- Genome polyprotein (29 kDa, Protein from Coxsackievirus B1)
- 9a3 heavy chain (13 kDa, Protein from Mus musculus)
- Virion protein 1 (31 kDa, Protein from Coxsackievirus B1)
- 9a3 light chain (11 kDa, Protein from Mus musculus)
EV-D68 in complex with 8F12 Fab
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 7ec5
Q-score: 0.548
Zhang C, Xu C, Dai W, Wang Y, Liu Z, Zhang X, Wang X, Wang H, Gong S, Cong Y, Huang Z
Nat Commun (2021) 12 pp. 2904-2904 [ Pubmed: 34006855 DOI: doi:10.1038/s41467-021-23199-5 ]
- Enterovirus d68 in complex with 8f12 fab (Complex)
- 8f12 fab (Complex from Mus musculus)
- 8f12 fab heavy chain (23 kDa, Protein from Mus musculus)
- Capsid protein vp3 (27 kDa, Protein from EV68, EV-68)
- Capsid protein vp1 (32 kDa, Protein from EV68, EV-68)
- Capsid protein vp4 (7 kDa, Protein from EV68, EV-68)
- 8f12 fab light chain (23 kDa, Protein from Mus musculus)
- Genome polyprotein (27 kDa, Protein from EV68, EV-68)
- Enterovirus d68 (Virus from Enterovirus D68)
Xu L, Zheng Q, Li S, He M, Wu Y, Li Y, Zhu R, Yu H, Hong Q, Jiang J, Li Z, Li S, Zhao H, Yang L, Hou W, Wang W, Ye X, Zhang J, Baker TS, Cheng T, Zhou ZH, Yan X, Xia N
Nat Commun (2017) 8 pp. 505-505 [ DOI: doi:10.1038/s41467-017-00477-9 Pubmed: 28894095 ]
- Light chain of fab 1d5 (11 kDa, Protein from Mus musculus)
- Genome polyprotein (26 kDa, Protein from Coxsackievirus A6)
- Genome polyprotein (28 kDa, Protein from Coxsackievirus A6)
- Heavy chain of fab 1d5 (13 kDa, Protein from Mus musculus)
- Genome polyprotein (33 kDa, Protein from Coxsackievirus A6)
- Structure of coxsackievirus a6 (cva6) virus a-particle in complex with the neutralizing antibody fragment 1d5 (Complex from Coxsackievirus A6)