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Cytoplasmic dynein-1 motor domain bound to dynactin-p150glued and LIS1
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8pqw
Q-score: 0.342
Singh K, Lau CK, Manigrasso G, Gama JB, Gassmann R, Carter AP
Science (2024) 383 pp. eadk8544-eadk8544 [ Pubmed: 38547289 DOI: doi:10.1126/science.adk8544 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Cytoplasmic dynein 1 intermediate chain 2 (68 kDa, Protein from Homo sapiens)
- Cytoplasmic dynein 1 heavy chain 1 (533 kDa, Protein from Homo sapiens)
- Cytoplasmic dynein-1 bound to dynactin p150 and lis1 (Complex from Homo sapiens)
- Dynactin subunit 1 (142 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- Platelet-activating factor acetylhydrolase ib subunit beta (46 kDa, Protein from Homo sapiens)
- Adenosine-5'-triphosphate (507 Da, Ligand)
Cytoplasmic dynein-1 A1/A2 motor domains bound to LIS1
Resolution: 5.5 Å
EM Method: Single-particle
Fitted PDBs: 8pqz
Q-score: 0.284
Singh K, Lau CK, Manigrasso G, Gama JB, Gassmann R, Carter AP
Science (2024) 383 pp. eadk8544-eadk8544 [ Pubmed: 38547289 DOI: doi:10.1126/science.adk8544 ]
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Cytoplasmic dynein 1 intermediate chain 2 (68 kDa, Protein from Homo sapiens)
- Cytoplasmic dynein 1 heavy chain 1 (533 kDa, Protein from Homo sapiens)
- Dynactin subunit 1 (142 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- Cytoplasmic dynein-a1/a2 motor domains bound to lis1 (Complex from Homo sapiens)
- Platelet-activating factor acetylhydrolase ib subunit beta (46 kDa, Protein from Homo sapiens)
- Adenosine-5'-triphosphate (507 Da, Ligand)
Cytoplasmic dynein-A heavy chain bound to dynactin-p150glued and IC-LC tower
Resolution: 9.4 Å
EM Method: Single-particle
Fitted PDBs: 8pr0
Q-score: 0.169
Singh K, Lau CK, Manigrasso G, Gama JB, Gassmann R, Carter AP
Science (2024) 383 pp. eadk8544-eadk8544 [ Pubmed: 38547289 DOI: doi:10.1126/science.adk8544 ]
- Cytoplasmic dynein 1 light intermediate chain 2 (54 kDa, Protein from Homo sapiens)
- Cytoplasmic dynein 1 intermediate chain 2 (68 kDa, Protein from Homo sapiens)
- Cytoplasmic dynein 1 heavy chain 1 (533 kDa, Protein from Homo sapiens)
- Dynactin subunit 1 (142 kDa, Protein from Sus scrofa)
- Cytoplasmic dynein-a heavy chain bound to dynactin p150 and ic-lc tower (Complex from Homo sapiens)
- Dynein light chain tctex-type 1 (12 kDa, Protein from Homo sapiens)
- Dynein light chain 1, cytoplasmic (10 kDa, Protein from Homo sapiens)
Composite structure of Dynein-Dynactin-JIP3-LIS1
Resolution: 10.0 Å
EM Method: Single-particle
Fitted PDBs: 8ptk
Q-score: 0.202
Singh K, Lau CK, Manigrasso G, Gama JB, Gassmann R, Carter AP
Science (2024) 383 pp. eadk8544-eadk8544 [ Pubmed: 38547289 DOI: doi:10.1126/science.adk8544 ]
- Composite structure of dynein-dynactin-jip3-lis1 (Complex)
- Dynein light chain roadblock-type 1 (10 kDa, Protein from Homo sapiens)
- Dynactin subunit 5 (20 kDa, Protein from Sus scrofa)
- Platelet-activating factor acetylhydrolase ib subunit beta (46 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Dynein light chain tctex-type 1 (12 kDa, Protein from Homo sapiens)
- Dynein and jip3 (Complex from Homo sapiens)
- Cytoplasmic dynein 1 light intermediate chain 2 (54 kDa, Protein from Homo sapiens)
- Dynactin subunit 4 (52 kDa, Protein from Sus scrofa)
- Dynactin subunit 3 (21 kDa, Protein from Sus scrofa)
- Dynactin subunits (Complex from Sus scrofa)
- Capping protein (actin filament) muscle z-line, alpha 1 (33 kDa, Protein from Sus scrofa)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Arp1 actin related protein 1 homolog a (42 kDa, Protein from Sus scrofa)
- Actin, cytoplasmic 1 (41 kDa, Protein from Sus scrofa)
- Dynactin 6 (20 kDa, Protein from Sus scrofa)
- Cytoplasmic dynein 1 intermediate chain 2 (68 kDa, Protein from Homo sapiens)
- Cytoplasmic dynein 1 heavy chain 1 (533 kDa, Protein from Homo sapiens)
- Dynactin subunit 1 (142 kDa, Protein from Sus scrofa)
- Dynein light chain 1, cytoplasmic (10 kDa, Protein from Homo sapiens)
- C-jun-amino-terminal kinase-interacting protein 3 (65 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- F-actin-capping protein subunit beta (30 kDa, Protein from Sus scrofa)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Arp11 (46 kDa, Protein from Sus scrofa)
- Dynactin subunit 2 (44 kDa, Protein from Sus scrofa)
Cryo-EM structure of mouse Piezo1-MDFIC complex (Masked refinement of the cap domain)
Cryo-EM structure of mouse Piezo1-MDFIC complex (masked refinement of the transmembrane domain)
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 8ouw
Q-score: 0.329
Xia Y, Sonneville R, Jenkyn-Bedford M, Ji L, Alabert C, Hong Y, Yeeles JTP, Labib KPM
Science (2023) 381 pp. eadi4932-eadi4932 [ Pubmed: 37590372 DOI: doi:10.1126/science.adi4932 ]
- Cell division control protein 45 homolog (66 kDa, Protein from Caenorhabditis elegans)
- Dna replication licensing factor mcm-6 (91 kDa, Protein from Caenorhabditis elegans)
- Dna lagging strand template (18 kDa, DNA from Saccharomyces cerevisiae)
- Probable dna replication complex gins protein psf2 (20 kDa, Protein from Caenorhabditis elegans)
- Zinc ion (65 Da, Ligand)
- Dna replication licensing factor mcm2 (99 kDa, Protein from Caenorhabditis elegans)
- Dna replication licensing factor mcm3 (90 kDa, Protein from Caenorhabditis elegans)
- Dna leading strand template (26 kDa, DNA from Saccharomyces cerevisiae)
- Dna replication licensing factor mcm-4 (91 kDa, Protein from Caenorhabditis elegans)
- Protein tipin homolog (27 kDa, Protein from Caenorhabditis elegans)
- Downstream neighbor of son homolog (66 kDa, Protein from Caenorhabditis elegans)
- Dna replication licensing factor mcm-5 (85 kDa, Protein from Caenorhabditis elegans)
- Probable dna replication complex gins protein psf1 (23 kDa, Protein from Caenorhabditis elegans)
- Dna replication complex gins protein sld5 (25 kDa, Protein from Caenorhabditis elegans)
- Dna replication licensing factor mcm7 (81 kDa, Protein from Caenorhabditis elegans)
- Dna replication complex gins protein psf3 (21 kDa, Protein from Caenorhabditis elegans)
- Magnesium ion (24 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Complex of cmg helicase bound to tim-1/tipn-1 and homodimeric dnsn-1 on fork dna (caenorhabditis elegans) (Complex from Caenorhabditis elegans)
- Protein timeless homolog (157 kDa, Protein from Caenorhabditis elegans)
Cryo-EM structure of mouse Piezo1-MDFIC complex (composite map)
Resolution: 3.66 Å
EM Method: Single-particle
Fitted PDBs: 8imz
Q-score: 0.424
Zhou Z, Ma X, Lin Y, Cheng D, Bavi N, Secker GA, Li JV, Janbandhu V, Sutton DL, Scott HS, Yao M, Harvey RP, Harvey NL, Corry B, Zhang Y, Cox CD
Science (2023) 381 pp. 799-804 [ DOI: doi:10.1126/science.adh8190 Pubmed: 37590348 ]
- Piezo1 in complex with mdfic (Complex from Mus musculus)
- Piezo-type mechanosensitive ion channel component 1 (292 kDa, Protein from Mus musculus)
- Myod family inhibitor domain-containing protein (26 kDa, Protein from Mus musculus)