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> Main
CHEBI:15698 - 2'-deoxycytidine
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ChEBI Name
2'-deoxycytidine
ChEBI ID
CHEBI:15698
Definition
A pyrimidine 2'-deoxyribonucleoside having cytosine as the nucleobase.
Stars
This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs
CHEBI:4407, CHEBI:41806, CHEBI:41417, CHEBI:41430, CHEBI:41434, CHEBI:19240
Supplier Information
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Read full article at Wikipedia
Formula
C9H13N3O4
Net Charge
0
Average Mass
227.21720
Monoisotopic Mass
227.09061
InChI
InChI=1S/C9H13N3O4/c10-
7-
1-
2-
12(9(15)
11-
7)
8-
3-
5(14)
6(4-
13)
16-
8/h1-
2,5-
6,8,13-
14H,3-
4H2,(H2,10,11,15)
/t5-
,6+,8+/m0/s1
InChIKey
CKTSBUTUHBMZGZ-SHYZEUOFSA-N
SMILES
Nc1ccn([C@H]2C[C@H](O)[C@@H](CO)O2)c(=O)n1
Metabolite of Species
Details
Mus musculus
(NCBI:txid10090)
Source: BioModels - MODEL1507180067 See:
PubMed
Saccharomyces cerevisiae
(NCBI:txid4932)
Source: yeast.sf.net See:
PubMed
Escherichia coli
(NCBI:txid562)
See:
PubMed
Homo sapiens
(NCBI:txid9606)
See:
DOI
Roles Classification
Biological Role
(s):
mouse metabolite
Any mammalian metabolite produced during a metabolic reaction in a mouse (
Mus musculus
).
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (
Homo sapiens
).
Saccharomyces cerevisiae metabolite
Any fungal metabolite produced during a metabolic reaction in Baker's yeast (
Saccharomyces cerevisiae
).
Escherichia coli metabolite
Any bacterial metabolite produced during a metabolic reaction in
Escherichia coli
.
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
2'-deoxycytidine (
CHEBI:15698
)
has functional parent
cytosine (
CHEBI:16040
)
2'-deoxycytidine (
CHEBI:15698
)
has role
Escherichia coli
metabolite (
CHEBI:76971
)
2'-deoxycytidine (
CHEBI:15698
)
has role
Saccharomyces cerevisiae
metabolite (
CHEBI:75772
)
2'-deoxycytidine (
CHEBI:15698
)
has role
human metabolite (
CHEBI:77746
)
2'-deoxycytidine (
CHEBI:15698
)
has role
mouse metabolite (
CHEBI:75771
)
2'-deoxycytidine (
CHEBI:15698
)
is a
pyrimidine 2'-deoxyribonucleoside (
CHEBI:19255
)
Incoming
N-Benzoyl-2'-deoxycytidine (
CHEBI:229529
)
has functional parent
2'-deoxycytidine (
CHEBI:15698
)
5-methyl-2'-deoxycytidine (
CHEBI:47876
)
is a
2'-deoxycytidine (
CHEBI:15698
)
IUPAC Name
2'-deoxycytidine
Synonyms
Sources
2'-DEOXYCYTIDINE
PDBeChem
2'-Deoxycytidine
KEGG COMPOUND
2'-deoxycytidine
UniProt
4-
amino-
1-
[(2
R
,4
S
,5
R
)-
4-
hydroxy-
5-
(hydroxymethyl)tetrahydrofuran-
2-
yl]pyrimidin-
2(1
H
)-
one
IUPAC
dC
ChEBI
dCYD
ChemIDplus
Deoxycytidine
KEGG COMPOUND
Manual Xrefs
Databases
C00881
KEGG COMPOUND
DB02594
DrugBank
DCZ
PDBeChem
Deoxycytidine
Wikipedia
DEOXYCYTIDINE
MetaCyc
HMDB0000014
HMDB
View more database links
Registry Numbers
Types
Sources
1321747
Gmelin Registry Number
Gmelin
87567
Reaxys Registry Number
Reaxys
951-77-9
CAS Registry Number
KEGG COMPOUND
951-77-9
CAS Registry Number
NIST Chemistry WebBook
951-77-9
CAS Registry Number
ChemIDplus
Citation
Type
Source
15778433
PubMed citation
Europe PMC
Last Modified
27 January 2016