Small-molecule inhibitor: pepstatin

Summary Structure Literature

Name

Common name
pepstatin
Other names
pepstatin A; S-PI

Inhibition

History
Pepstatin was discovered as an inhibitor of pepsin by Umezawa et al. (1970). An N-acetyl variant was described independently by Fukumura et al. (1971). Until 1970, no potent reversible inhibitors of aspartic peptidases had been known.
Peptidases inhibited
Pepstatin inhibits peptidases in families A1 and A2 (e.g. Fujinaga et al., 1995; Prashar et al., 2004). It also inhibits Alzheimer"s gamma-secretase, an activity of presenilin: Tian et al., 2002), which is an unrelated aspartic peptidase.
Mechanism
Pepstatin is a tight-binding, reversible inhibitor, acting as an analogue of the tetrahedral intermediate in catalysis. The minimal structural requirements for tight-binding inhibition of pepsin were explored by Rich & Bernatowicz (1982). A typical Ki value is that of 5 x 10-10 M obtained for human cathepsin D (Knight & Barrett, 1976).

Chemistry

CID at PubChem
71390
ChEBI
624227
Structure
[pepstatin (A01.001 inhibitor) structure ]
Chemical/biochemical name
3-hydroxy-4-[2-[3-hydroxy-6-methyl-4-[3-methyl-2-[3-methyl-2-(3-methylbutanoylamino)butanoyl]amino-butanoyl]amino-heptanoyl]- aminopropanoylamino]-6-methyl-heptanoic acid
Formula weight
686
Related inhibitors
statine

General

Comment
Many structural variants of pepstatin are known, and the beta-amino acid termed statine that is contained in pepstatin has been used in the development of other inhibitors (Agarwal & Rich, 1986). Immobilized derivatives of pepstatin have proved to be effective ligands for affinity purification of aspartic peptidases (Suzuki et al., 1981; Rittenhouse et al., 1990).
Reviews
Szewczuk et al. (1992)