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State B of the Trypanosoma brucei mitoribosomal large subunit assembly intermediate
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6yxy
Q-score: 0.508
Jaskolowski M, Ramrath DJF, Bieri P, Niemann M, Mattei S, Calderaro S, Leibundgut M, Horn EK, Boehringer D, Schneider A, Ban N
Mol Cell (2020) 79 pp. 629-644.e4 [ Pubmed: 32679035 DOI: doi:10.1016/j.molcel.2020.06.030 ]
- Ml78 (35 kDa, Protein from Trypanosoma brucei brucei)
- Ml95 (17 kDa, Protein from Trypanosoma brucei brucei)
- Ul3m (55 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf14 (82 kDa, Protein from Trypanosoma brucei brucei)
- Ul11m (40 kDa, Protein from Trypanosoma brucei brucei)
- Ml94 (17 kDa, Protein from Trypanosoma brucei brucei)
- Ml76 (39 kDa, Protein from Trypanosoma brucei brucei)
- Ml90 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ml89 (22 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf20 (6 kDa, Protein from Trypanosoma brucei brucei)
- Ml81 (29 kDa, Protein from Trypanosoma brucei brucei)
- Unk (2 kDa, Protein from Trypanosoma brucei brucei)
- Ul4m (53 kDa, Protein from Trypanosoma brucei brucei)
- Ul22m (32 kDa, Protein from Trypanosoma brucei brucei)
- Unk (6 kDa, Protein from Trypanosoma brucei brucei)
- Ml64 (28 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf19 (12 kDa, Protein from Trypanosoma brucei brucei)
- Mt-enga (65 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf7 (18 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf12 (77 kDa, Protein from Trypanosoma brucei brucei)
- Ul30m (25 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf2 (85 kDa, Protein from Trypanosoma brucei brucei)
- Spermidine (145 Da, Ligand)
- Ml53 (35 kDa, Protein from Trypanosoma brucei brucei)
- Bl20m (24 kDa, Protein from Trypanosoma brucei brucei)
- Ml63 (18 kDa, Protein from Trypanosoma brucei brucei)
- Ml42 (21 kDa, Protein from Trypanosoma brucei brucei)
- Bl17m (35 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf6 (40 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf18 (58 kDa, Protein from Trypanosoma brucei brucei)
- Ml41 (22 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf4 (69 kDa, Protein from Trypanosoma brucei brucei)
- Ml84 (24 kDa, Protein from Trypanosoma brucei brucei)
- Ml100 (10 kDa, Protein from Trypanosoma brucei brucei)
- Ml77 (43 kDa, Protein from Trypanosoma brucei brucei)
- Mt-laf15a (34 kDa, Protein from Trypanosoma brucei brucei)
- Ml101 (28 kDa, Protein from Trypanosoma brucei brucei)
- Ml80 (34 kDa, Protein from Trypanosoma brucei brucei)
- Bl19m (16 kDa, Protein from Trypanosoma brucei brucei)
- Unk (15 kDa, Protein from Trypanosoma brucei brucei)
- Mt-engb (71 kDa, Protein from Trypanosoma brucei brucei)
- Ul14m (25 kDa, Protein from Trypanosoma brucei brucei)
- Ml99 (12 kDa, Protein from Trypanosoma brucei brucei)
- Ml98 (12 kDa, Protein from Trypanosoma brucei brucei)
- Ml70 (62 kDa, Protein from Trypanosoma brucei brucei)
- Ml85 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ml72 (49 kDa, Protein from Trypanosoma brucei brucei)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Mt-laf8 (68 kDa, Protein from Trypanosoma brucei brucei)
- Ml71 (50 kDa, Protein from Trypanosoma brucei brucei)
- Mtg1 (50 kDa, Protein from Trypanosoma brucei brucei)
- Ml92 (20 kDa, Protein from Trypanosoma brucei brucei)
- Ul24m (43 kDa, Protein from Trypanosoma brucei brucei)
- Mt-acp (16 kDa, Protein from Trypanosoma brucei brucei)
- Ul13m (24 kDa, Protein from Trypanosoma brucei brucei)
- Nicotinamide-adenine-dinucleotide (663 Da, Ligand)
- Ml43 (31 kDa, Protein from Trypanosoma brucei brucei)
- Water (18 Da, Ligand)
- Unk (2 kDa, Protein from Trypanosoma brucei brucei)
- State b of the trypanosoma brucei mitoribosomal large subunit assembly intermediate (Complex from Trypanosoma brucei brucei)
- Mt-laf5 (67 kDa, Protein from Trypanosoma brucei brucei)
- 12s ribosomal rna (373 kDa, RNA from Trypanosoma brucei brucei)
- Ml86 (22 kDa, Protein from Trypanosoma brucei brucei)
- Ml88 (22 kDa, Protein from Trypanosoma brucei brucei)
- Bl28m (28 kDa, Protein from Trypanosoma brucei brucei)
- Unk (698 Da, Protein from Trypanosoma brucei brucei)
- Bl21m (20 kDa, Protein from Trypanosoma brucei brucei)
- Ul23m (28 kDa, Protein from Trypanosoma brucei brucei)
- Ml67 (93 kDa, Protein from Trypanosoma brucei brucei)
- Malsu1 (39 kDa, Protein from Trypanosoma brucei brucei)
- Sodium ion (22 Da, Ligand)
- Bl9m (30 kDa, Protein from Trypanosoma brucei brucei)
- Ml93 (18 kDa, Protein from Trypanosoma brucei brucei)
- Ml52 (167 kDa, Protein from Trypanosoma brucei brucei)
- Zinc ion (65 Da, Ligand)
- Ml75 (39 kDa, Protein from Trypanosoma brucei brucei)
- Bl35m (21 kDa, Protein from Trypanosoma brucei brucei)
- Ul29m (54 kDa, Protein from Trypanosoma brucei brucei)
- Ml87 (22 kDa, Protein from Trypanosoma brucei brucei)
- L0r8f8 (13 kDa, Protein from Trypanosoma brucei brucei)
- Unk (1 kDa, Protein from Trypanosoma brucei brucei)
- Ml49 (24 kDa, Protein from Trypanosoma brucei brucei)
- Ml68 (62 kDa, Protein from Trypanosoma brucei brucei)
- Ul15m (43 kDa, Protein from Trypanosoma brucei brucei)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Mt-laf3 (46 kDa, Protein from Trypanosoma brucei brucei)
- S-(2-{[n-(2-hydroxy-4-{[hydroxy(oxido)phosphino]oxy}-3,3-dimethylbutanoyl)-beta-alanyl]amino}ethyl) decanethioate (496 Da, Ligand)
- Ml74 (39 kDa, Protein from Trypanosoma brucei brucei)
- Bl32m (9 kDa, Protein from Trypanosoma brucei brucei)
- Magnesium ion (24 Da, Ligand)
- Ml83 (25 kDa, Protein from Trypanosoma brucei brucei)