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55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 7nsi
Q-score: 0.228
Kummer E, Schubert KN, Schoenhut T, Scaiola A, Ban N
Mol Cell (2021) 81 pp. 2566-2582.e6 [ DOI: doi:10.1016/j.molcel.2021.03.042 Pubmed: 33878294 ]
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from Pig)
- 12s rrna (308 kDa, RNA from Pig)
- Tgs domain-containing protein (38 kDa, Protein from Pig)
- Cp trnaphe (23 kDa, RNA from Pig)
- 39s ribosomal protein l20, mitochondrial isoform 1 (17 kDa, Protein from Pig)
- Spermine (202 Da, Ligand)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from Pig)
- 39s ribosomal protein l27, mitochondrial (15 kDa, Protein from Pig)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from Pig)
- 28s ribosomal protein s35, mitochondrial isoform 1 (37 kDa, Protein from Pig)
- 39s ribosomal protein s30, mitochondrial (49 kDa, Protein from Pig)
- 39s ribosomal protein l17, mitochondrial (19 kDa, Protein from Pig)
- Death associated protein 3 (46 kDa, Protein from Pig)
- 28s ribosomal protein s14, mitochondrial (15 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s27 (51 kDa, Protein from Pig)
- 39s ribosomal protein l11, mitochondrial isoform a (20 kDa, Protein from Pig)
- 39s ribosomal protein l49, mitochondrial (18 kDa, Protein from Pig)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s23 (21 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l12 (21 kDa, Protein from Pig)
- Ribosome-recycling factor, mitochondrial (28 kDa, Protein from Homo sapiens)
- Ribosome-recycling factor, mitochondrial (Complex from Homo sapiens)
- 39s ribosomal protein l21, mitochondrial isoform d (23 kDa, Protein from Pig)
- Water (18 Da, Ligand)
- 39s ribosomal protein l48, mitochondrial (29 kDa, Protein from Pig)
- 39s ribosomal protein l37, mitochondrial (47 kDa, Protein from Pig)
- 16s rrna (504 kDa, RNA from Pig)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Pig)
- Ml42 (16 kDa, Protein from Pig)
- 39s ribosomal protein l24, mitochondrial isoform x1 (24 kDa, Protein from Pig)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Pig)
- Mitoribosomal protein us12m, mrps12 (15 kDa, Protein from Pig)
- Ribosomal_l2_c domain-containing protein (33 kDa, Protein from Pig)
- Bl32m (21 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l58 (23 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l47 (30 kDa, Protein from Pig)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Pig)
- 28s ribosomal protein s10, mitochondrial (23 kDa, Protein from Pig)
- 39s ribosomal protein l43, mitochondrial isoform x2 (17 kDa, Protein from Pig)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from Pig)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Pig)
- Guanosine-5'-monophosphate (363 Da, Ligand)
- Ul14m (15 kDa, Protein from Pig)
- 28s ribosomal protein s9, mitochondrial (45 kDa, Protein from Pig)
- 28s ribosomal protein s7, mitochondrial (28 kDa, Protein from Pig)
- Guanosine-5'-triphosphate (523 Da, Ligand)
- Mitochondrial ribosomal protein s6 (30 kDa, Protein from Pig)
- 28s ribosomal protein s5, mitochondrial isoform x2 (48 kDa, Protein from Pig)
- Unknown (1 kDa, Protein from Pig)
- 28s ribosomal protein s31, mitochondrial (44 kDa, Protein from Pig)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from Pig)
- 39s ribosomal protein l46, mitochondrial (32 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l55 (15 kDa, Protein from Pig)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from Pig)
- Pentatricopeptide repeat domain 3,pentatricopeptide repeat domain 3,ms39,pentatricopeptide repeat domain 3,pentatricopeptide repeat domain 3 (76 kDa, Protein from Pig)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Pig)
- Ict1 (43 kDa, Protein from Pig)
- Zinc ion (65 Da, Ligand)
- Us17m (14 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s33 (12 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l45 (35 kDa, Protein from Pig)
- Aurora kinase a interacting protein 1 (22 kDa, Protein from Pig)
- 28s ribosomal protein s15, mitochondrial (27 kDa, Protein from Pig)
- 28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Pig)
- Trna (p/e) (21 kDa, RNA from Pig)
- 39s ribosomal protein l50, mitochondrial (22 kDa, Protein from Pig)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s22 (43 kDa, Protein from Pig)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from Pig)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Pig)
- 28s ribosomal protein s2, mitochondrial (31 kDa, Protein from Pig)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from Pig)
- 55s mammalian mitochondrial ribosome with mtrrf (pre) and trna(p/e) (Complex)
- Mitochondrial ribosomal protein s34 (25 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l41 (15 kDa, Protein from Pig)
- 55s mammalian mitochondrial ribosome (Complex from Sus scrofa)
- Ribosomal protein (10 kDa, Protein from Pig)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Pig)
- Mrna (1 kDa, RNA from Pig)
- 28s ribosomal protein s24, mitochondrial (18 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s11 (20 kDa, Protein from Pig)
- 39s ribosomal protein l18, mitochondrial isoform 1 (20 kDa, Protein from Pig)
- 39s ribosomal protein l10, mitochondrial isoform a (29 kDa, Protein from Pig)
- Interferon alpha-inducible protein 6 (19 kDa, Protein from Pig)
- 28s ribosomal protein s28, mitochondrial (21 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l40 (24 kDa, Protein from Pig)
- Coiled-coil-helix-coiled-coil-helix domain containing 1 (13 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l57 (12 kDa, Protein from Pig)
- Ml53 (12 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l4 (33 kDa, Protein from Pig)
- 28s ribosomal protein s26, mitochondrial (23 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s18a (22 kDa, Protein from Pig)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from Pig)
- 39s ribosomal protein l59, mitochondrial (25 kDa, Protein from Pig)
- 28s ribosomal protein s18c, mitochondrial isoform 1 (16 kDa, Protein from Pig)
- Magnesium ion (24 Da, Ligand)
- 39s ribosomal protein l52, mitochondrial (13 kDa, Protein from Pig)
Cryo-EM structure of the human 55S mitoribosome in complex with RRFmt and EF-G2mt
Koripella RK, Deep A, Agrawal EK, Keshavan P, Banavali NK, Agrawal RK
Nat Commun (2021) 12 pp. 3607-3607 [ DOI: doi:10.1038/s41467-021-23726-4 Pubmed: 34127662 ]
Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 7l20
Q-score: 0.472
Koripella RK, Deep A, Agrawal EK, Keshavan P, Banavali NK, Agrawal RK
Nat Commun (2021) 12 pp. 3607-3607 [ DOI: doi:10.1038/s41467-021-23726-4 Pubmed: 34127662 ]
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Human)
- 39s ribosomal protein l10, mitochondrial (29 kDa, Protein from Human)
- 39s ribosomal protein l4, mitochondrial (34 kDa, Protein from Human)
- 39s ribosomal protein l19, mitochondrial (33 kDa, Protein from Human)
- 39s ribosomal protein l3, mitochondrial (38 kDa, Protein from Human)
- 39s ribosomal protein l43, mitochondrial (17 kDa, Protein from Human)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from Human)
- Cdna flj76418, highly similar to homo sapiens mitochondrial ribosomal protein l52 (mrpl52), transcript variant 1, mrna (13 kDa, Protein from Human)
- 39s ribosomal protein l47, mitochondrial (29 kDa, Protein from Human)
- 39s ribosomal protein l16, mitochondrial (28 kDa, Protein from Human)
- Trnaval (23 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l34, mitochondrial (10 kDa, Protein from Human)
- 39s ribosomal protein s30, mitochondrial (50 kDa, Protein from Human)
- 39s ribosomal protein l46, mitochondrial (31 kDa, Protein from Human)
- 39s ribosomal protein l28, mitochondrial (30 kDa, Protein from Human)
- 39s ribosomal protein l32, mitochondrial (21 kDa, Protein from Human)
- 39s ribosomal protein l49, mitochondrial (19 kDa, Protein from Human)
- 39s ribosomal protein l11, mitochondrial (20 kDa, Protein from Human)
- 39s ribosomal protein l12, mitochondrial (21 kDa, Protein from Human)
- 39s ribosomal protein l2, mitochondrial (33 kDa, Protein from Human)
- 39s ribosomal protein l45, mitochondrial (35 kDa, Protein from Human)
- 39s ribosomal protein l17, mitochondrial (20 kDa, Protein from Human)
- 39s ribosomal protein l39, mitochondrial (38 kDa, Protein from Human)
- Ribosomal protein 63, mitochondrial (12 kDa, Protein from Human)
- 39s ribosomal protein l53, mitochondrial (12 kDa, Protein from Human)
- 39s ribosomal protein l14, mitochondrial (15 kDa, Protein from Human)
- 39s ribosomal protein l38, mitochondrial (44 kDa, Protein from Human)
- 39s ribosomal protein s18a, mitochondrial (22 kDa, Protein from Human)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
- 39s ribosomal protein l30, mitochondrial (18 kDa, Protein from Human)
- 39s ribosomal protein l33, mitochondrial (7 kDa, Protein from Human)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Human)
- Growth arrest and dna damage-inducible proteins-interacting protein 1 (25 kDa, Protein from Human)
- 39s ribosomal protein l55, mitochondrial (15 kDa, Protein from Human)
- 39s ribosomal protein l37, mitochondrial (48 kDa, Protein from Human)
- 39s ribosomal protein l9, mitochondrial (30 kDa, Protein from Human)
- 39 s p-site finger (5 kDa, Protein from Homo sapiens)
- 39s ribosomal protein l50, mitochondrial (18 kDa, Protein from Human)
- Ribosome-recycling factor, mitochondrial (22 kDa, Protein from Human)
- 39s ribosomal protein l20, mitochondrial (17 kDa, Protein from Human)
- 39s ribosomal protein l24, mitochondrial (24 kDa, Protein from Human)
- 39s ribosomal protein l48, mitochondrial (21 kDa, Protein from Human)
- Mitochondrial ribosomal protein l18, isoform cra_b (20 kDa, Protein from Human)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Human)
- 39s ribosomal protein l22, mitochondrial (24 kDa, Protein from Human)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Human)
- Zinc ion (65 Da, Ligand)
- Ribosome-releasing factor 2, mitochondrial (77 kDa, Protein from Human)
- 16s rrna mitochondrial (500 kDa, RNA from Homo sapiens)
- 39s ribosomal protein l21, mitochondrial (22 kDa, Protein from Human)
- 39s ribosomal protein l51, mitochondrial (15 kDa, Protein from Human)
- 39s ribosomal protein l44, mitochondrial (37 kDa, Protein from Human)
- 39s ribosomal protein l54, mitochondrial (15 kDa, Protein from Human)
- 39s ribosomal protein l40, mitochondrial (24 kDa, Protein from Human)
- 39s ribosomal protein l42, mitochondrial (16 kDa, Protein from Human)
- Peptidyl-trna hydrolase ict1, mitochondrial (23 kDa, Protein from Human)
- 39s ribosomal protein l27, mitochondrial (16 kDa, Protein from Human)
- Magnesium ion (24 Da, Ligand)
- Cryo-em structure of mammalian mitochondrial ribosome complex with mtefg-2 and mtrrf (Complex from Homo sapiens)
- 39s ribosomal protein l36, mitochondrial (11 kDa, Protein from Human)
39S mammalian mitochondrial large ribosomal subunit with mtRRF (post) and mtEFG2
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7nsh
Q-score: 0.49
Kummer E, Schubert KN, Schoenhut T, Scaiola A, Ban N
Mol Cell (2021) 81 pp. 2566-2582.e6 [ DOI: doi:10.1016/j.molcel.2021.03.042 Pubmed: 33878294 ]
- Mitochondrial ribosomal protein l12 (21 kDa, Protein from Pig)
- Ul16m (28 kDa, Protein from Pig)
- Ribosome-recycling factor, mitochondrial (28 kDa, Protein from Homo sapiens)
- Mtrrf (post) and mtefg2 (Complex from Homo sapiens)
- Bl33m (7 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l9 (30 kDa, Protein from Pig)
- Guanosine-5'-monophosphate (363 Da, Ligand)
- 39s mammalian mitochondrial large ribosomal subunit with mtrrf (post) and mtefg2 (Complex)
- Ul14m (15 kDa, Protein from Pig)
- Ul2m (33 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l38 (44 kDa, Protein from Pig)
- Cp trnaphe (23 kDa, RNA from Pig)
- Mitochondrial ribosomal protein l10 (29 kDa, Protein from Pig)
- Ml54 (15 kDa, Protein from Pig)
- Ul23m (17 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l51 (15 kDa, Protein from Pig)
- Bl17m (19 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l39 (38 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l41 (15 kDa, Protein from Pig)
- Spermine (202 Da, Ligand)
- Ml44 (37 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l46 (32 kDa, Protein from Pig)
- Water (18 Da, Ligand)
- Ribosomal protein (10 kDa, Protein from Pig)
- 39s ribosomal protein l48, mitochondrial (29 kDa, Protein from Pig)
- Ul24m (24 kDa, Protein from Pig)
- Phosphoaminophosphonic acid-guanylate ester (522 Da, Ligand)
- 16s rrna (504 kDa, RNA from Pig)
- Mrpl34 (18 kDa, Protein from Pig)
- Ml52 (13 kDa, Protein from Pig)
- 39s ribosomal protein s30, mitochondrial (49 kDa, Protein from Pig)
- Ml62 (ict1) (23 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l40 (24 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l27 (15 kDa, Protein from Pig)
- Ml42 (16 kDa, Protein from Pig)
- Ul15m (33 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l28 (30 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l21 (23 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l57 (12 kDa, Protein from Pig)
- 39s mammalian mitochondrial large ribosomal subunit (Complex from Sus scrofa)
- Mitochondrial ribosomal protein l11 (20 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l35 (21 kDa, Protein from Pig)
- Bl32m (21 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l19 (33 kDa, Protein from Pig)
- Ict1 (43 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l50 (22 kDa, Protein from Pig)
- Bl31m (15 kDa, Protein from Pig)
- Ml53 (12 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l34 (10 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l4 (33 kDa, Protein from Pig)
- Zinc ion (65 Da, Ligand)
- Ribosome-releasing factor 2, mitochondrial (83 kDa, Protein from Homo sapiens)
- Ul13m (20 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l37 (47 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l20 (17 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l47 (30 kDa, Protein from Pig)
- Ul30m (18 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l45 (35 kDa, Protein from Pig)
- Mitochondrial ribosomal protein s18a (22 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l18 (20 kDa, Protein from Pig)
- Ul22m (24 kDa, Protein from Pig)
- Mitochondrial ribosomal protein l43 (17 kDa, Protein from Pig)
- Magnesium ion (24 Da, Ligand)
- Ml64 (25 kDa, Protein from Pig)
Structural insights into unique features of the human mitochondrial ribosome recycling
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6nu2
Q-score: 0.246
Koripella RK, Sharma MR, Risteff P, Keshavan P, Agrawal RK
PNAS (2019) 116 pp. 8283-8288 [ Pubmed: 30962385 DOI: doi:10.1073/pnas.1815675116 ]
- 39s ribosomal protein l20, mitochondrial (16 kDa, Protein from Human)
- 28s ribosomal protein s26, mitochondrial (20 kDa, Protein from Human)
- 39s ribosomal protein l43, mitochondrial (16 kDa, Protein from Human)
- 39s ribosomal protein l42, mitochondrial (12 kDa, Protein from Human)
- 12s rrna (296 kDa, RNA from Human)
- 39s ribosomal protein l16, mitochondrial (23 kDa, Protein from Human)
- 28s ribosomal protein s18b, mitochondrial (21 kDa, Protein from Human)
- 39s ribosomal protein s18a, mitochondrial (18 kDa, Protein from Human)
- 39s ribosomal protein l24, mitochondrial (23 kDa, Protein from Human)
- 39s ribosomal protein l40, mitochondrial (11 kDa, Protein from Human)
- 28s ribosomal protein s17, mitochondrial (12 kDa, Protein from Human)
- 39s ribosomal protein l36, mitochondrial (4 kDa, Protein from Human)
- 39s ribosomal protein l52, mitochondrial (9 kDa, Protein from Human)
- 28s ribosomal protein s6, mitochondrial (13 kDa, Protein from Human)
- 39s ribosomal protein l33, mitochondrial (6 kDa, Protein from Human)
- Ribosomal protein 63, mitochondrial (11 kDa, Protein from Human)
- 39s ribosomal protein l28, mitochondrial (28 kDa, Protein from Human)
- 39s ribosomal protein l46, mitochondrial (27 kDa, Protein from Human)
- 28s ribosomal protein s23, mitochondrial (14 kDa, Protein from Human)
- 28s ribosomal protein s12, mitochondrial (12 kDa, Protein from Human)
- 39s ribosomal protein l13, mitochondrial (20 kDa, Protein from Human)
- 39s ribosomal protein l50, mitochondrial (11 kDa, Protein from Human)
- 39s ribosomal protein l54, mitochondrial (3 kDa, Protein from Human)
- 39s ribosomal protein l14, mitochondrial (12 kDa, Protein from Human)
- 28s ribosomal protein s28, mitochondrial (10 kDa, Protein from Human)
- 28s ribosomal protein s31, mitochondrial (12 kDa, Protein from Human)
- 28s ribosomal protein s16, mitochondrial (13 kDa, Protein from Human)
- Growth arrest and dna damage-inducible proteins-interacting protein 1 (15 kDa, Protein from Human)
- 39s ribosomal protein l34, mitochondrial (5 kDa, Protein from Human)
- 39s ribosomal protein l41, mitochondrial (14 kDa, Protein from Human)
- 28s ribosomal protein s22, mitochondrial (28 kDa, Protein from Human)
- 28s ribosomal protein s14, mitochondrial (12 kDa, Protein from Human)
- Magnesium ion (24 Da, Ligand)
- 39s ribosomal protein l51, mitochondrial (11 kDa, Protein from Human)
- E-site trna (589 Da, RNA from Human)
- 28s ribosomal protein s24, mitochondrial (15 kDa, Protein from Human)
- 28s ribosomal protein s7, mitochondrial (24 kDa, Protein from Human)
- Ribosome-recycling factor, mitochondrial (22 kDa, Protein from Human)
- 39s ribosomal protein l37, mitochondrial (45 kDa, Protein from Human)
- Mt-trnaval (17 kDa, RNA from Human)
- 16s rrna (472 kDa, RNA from Human)
- 28s ribosomal protein s18c, mitochondrial (11 kDa, Protein from Human)
- 39s ribosomal protein l2, mitochondrial (26 kDa, Protein from Human)
- 39s ribosomal protein l21, mitochondrial (17 kDa, Protein from Human)
- 28s ribosomal protein s10, mitochondrial (14 kDa, Protein from Human)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Human)
- 39s ribosomal protein l19, mitochondrial (25 kDa, Protein from Human)
- 39s ribosomal protein l15, mitochondrial (32 kDa, Protein from Human)
- 39s ribosomal protein l48, mitochondrial (16 kDa, Protein from Human)
- 39s ribosomal protein l32, mitochondrial (12 kDa, Protein from Human)
- 28s ribosomal protein s11, mitochondrial (14 kDa, Protein from Human)
- 39s ribosomal protein l45, mitochondrial (20 kDa, Protein from Human)
- 39s ribosomal protein l17, mitochondrial (17 kDa, Protein from Human)
- 39s ribosomal protein l53, mitochondrial (9 kDa, Protein from Human)
- 28s ribosomal protein s2, mitochondrial (25 kDa, Protein from Human)
- 39s ribosomal protein l47, mitochondrial (21 kDa, Protein from Human)
- Zinc ion (65 Da, Ligand)
- 28s ribosomal protein s15, mitochondrial (19 kDa, Protein from Human)
- 39s ribosomal protein l22, mitochondrial (19 kDa, Protein from Human)
- 39s ribosomal protein l49, mitochondrial (15 kDa, Protein from Human)
- 39s ribosomal protein l44, mitochondrial (32 kDa, Protein from Human)
- 39s ribosomal protein l27, mitochondrial (12 kDa, Protein from Human)
- Aurora kinase a-interacting protein (8 kDa, Protein from Human)
- Peptidyl-trna hydrolase ict1, mitochondrial (18 kDa, Protein from Human)
- 28s ribosomal protein s33, mitochondrial (10 kDa, Protein from Human)
- 39s ribosomal protein l11, mitochondrial (15 kDa, Protein from Human)
- 39s ribosomal protein s30, mitochondrial (45 kDa, Protein from Human)
- 39s ribosomal protein l4, mitochondrial (28 kDa, Protein from Human)
- Pentatricopeptide repeat domain-containing protein 3, mitochondrial (50 kDa, Protein from Human)
- 39s ribosomal protein l39, mitochondrial (33 kDa, Protein from Human)
- 39s ribosomal protein l9, mitochondrial (11 kDa, Protein from Human)
- Structural insights into unique features of the human mitochondrial ribosome bound with mtrrf -class-1 (Complex from Homo sapiens)
- 39s ribosomal protein l55, mitochondrial (5 kDa, Protein from Human)
- 28s ribosomal protein s5, mitochondrial (38 kDa, Protein from Human)
- 28s ribosomal protein s25, mitochondrial (19 kDa, Protein from Human)
- 39s ribosomal protein l38, mitochondrial (41 kDa, Protein from Human)
- 28s ribosomal protein s9, mitochondrial (38 kDa, Protein from Human)
- 39s ribosomal protein l23, mitochondrial (13 kDa, Protein from Human)
- 28s ribosomal protein s27, mitochondrial (42 kDa, Protein from Human)
- 39s ribosomal protein l18, mitochondrial (15 kDa, Protein from Human)
- 39s ribosomal protein l10, mitochondrial (19 kDa, Protein from Human)
- 39s ribosomal protein l30, mitochondrial (13 kDa, Protein from Human)
- 28s ribosomal protein s34, mitochondrial (24 kDa, Protein from Human)
- Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 (13 kDa, Protein from Human)
- Unknown protein/protein extension (2 kDa, Protein from Human)
- 39s ribosomal protein l35, mitochondrial (11 kDa, Protein from Human)
- 39s ribosomal protein l3, mitochondrial (34 kDa, Protein from Human)
- 28s ribosomal protein s29, mitochondrial (39 kDa, Protein from Human)
- 28s ribosomal protein s35, mitochondrial (31 kDa, Protein from Human)
Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6eri
Q-score: 0.514
Boerema AP, Aibara S, Paul B, Tobiasson V, Kimanius D, Forsberg BO, Wallden K, Lindahl E, Amunts A
Nat Plants (2018) 4 pp. 212-217 [ Pubmed: 29610536 DOI: doi:10.1038/s41477-018-0129-6 ]
- 30s ribosomal protein s21, chloroplastic (7 kDa, Protein from Spinach)
- 30s ribosomal protein s4, chloroplastic (23 kDa, Protein from Spinach)
- 30s ribosomal protein s15, chloroplastic (8 kDa, Protein from Spinach)
- 30s ribosomal protein s3, chloroplastic (24 kDa, Protein from Spinach)
- 50s ribosomal protein l4, chloroplastic (23 kDa, Protein from Spinach)
- 30s ribosomal protein s6 alpha, chloroplastic (12 kDa, Protein from Spinach)
- 50s ribosomal protein l18, chloroplastic (13 kDa, Protein from Spinach)
- 50s ribosomal protein l13, chloroplastic (22 kDa, Protein from Spinach)
- 30s ribosomal protein s10 alpha, chloroplastic (11 kDa, Protein from Spinach)
- 30s ribosomal protein s16, chloroplastic (9 kDa, Protein from Spinach)
- 50s ribosomal protein 6, chloroplastic (5 kDa, Protein from Spinach)
- 30s ribosomal protein s13, chloroplastic (13 kDa, Protein from Spinach)
- 30s ribosomal protein s17, chloroplastic (9 kDa, Protein from Spinach)
- 50s ribosomal protein 5 alpha, chloroplastic (6 kDa, Protein from Spinach)
- 23s ribosomal rna (911 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein l35, chloroplastic (8 kDa, Protein from Spinach)
- Ribosome-recycling factor, chloroplastic (21 kDa, Protein from Spinach)
- 30s ribosomal protein s31, chloroplastic (4 kDa, Protein from Spinach)
- Chloroplast ribosome in complex with rrf (Complex from Spinacia oleracea)
- 50s ribosomal protein l5, chloroplastic (23 kDa, Protein from Spinach)
- 50s ribosomal protein l23, chloroplastic (10 kDa, Protein from Spinach)
- 50s ribosomal protein l19, chloroplastic (13 kDa, Protein from Spinach)
- Magnesium ion (24 Da, Ligand)
- 50s ribosomal protein l15, chloroplastic (20 kDa, Protein from Spinach)
- 5s ribosomal rna (38 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein l32, chloroplastic (5 kDa, Protein from Spinach)
- Bs1c (14 kDa, Protein from Spinacia oleracea)
- 30s ribosomal protein s9, chloroplastic (15 kDa, Protein from Spinach)
- Ribosome-binding factor psrp1, chloroplastic (11 kDa, Protein from Spinach)
- 50s ribosomal protein l29, chloroplastic (11 kDa, Protein from Spinach)
- 30s ribosomal protein s20, chloroplastic (11 kDa, Protein from Spinach)
- 50s ribosomal protein l6, chloroplastic (19 kDa, Protein from Spinach)
- 50s ribosomal protein l34, chloroplastic (6 kDa, Protein from Spinach)
- 50s ribosomal protein l2, chloroplastic (26 kDa, Protein from Spinach)
- 16s ribosomal rna (480 kDa, RNA from Spinacia oleracea)
- 30s ribosomal protein s11, chloroplastic (11 kDa, Protein from Spinach)
- 50s ribosomal protein l36, chloroplastic (4 kDa, Protein from Spinach)
- 50s ribosomal protein l22, chloroplastic (19 kDa, Protein from Spinach)
- 50s ribosomal protein l16, chloroplastic (15 kDa, Protein from Spinach)
- 30s ribosomal protein s12, chloroplastic (13 kDa, Protein from Spinach)
- 50s ribosomal protein l9, chloroplastic (5 kDa, Protein from Spinach)
- 30s ribosomal protein s19, chloroplastic (9 kDa, Protein from Spinach)
- 30s ribosomal protein s2, chloroplastic (24 kDa, Protein from Spinach)
- 4.5s ribosomal rna (34 kDa, RNA from Spinacia oleracea)
- 50s ribosomal protein l27, chloroplastic (12 kDa, Protein from Spinach)
- Zinc ion (65 Da, Ligand)
- 50s ribosomal protein l31, chloroplastic (7 kDa, Protein from Spinach)
- 50s ribosomal protein l24, chloroplastic (14 kDa, Protein from Spinach)
- 30s ribosomal protein s18, chloroplastic (6 kDa, Protein from Spinach)
- 50s ribosomal protein l17, chloroplastic (13 kDa, Protein from Spinach)
- 50s ribosomal protein l3, chloroplastic (24 kDa, Protein from Spinach)
- 30s ribosomal protein s5, chloroplastic (16 kDa, Protein from Spinach)
- 50s ribosomal protein l28, chloroplastic (8 kDa, Protein from Spinach)
- 50s ribosomal protein l14, chloroplastic (13 kDa, Protein from Spinach)
- 30s ribosomal protein s7, chloroplastic (16 kDa, Protein from Spinach)
- 50s ribosomal protein l20, chloroplastic (14 kDa, Protein from Spinach)
- 30s ribosomal protein s14, chloroplastic (11 kDa, Protein from Spinach)
- 30s ribosomal protein s8, chloroplastic (15 kDa, Protein from Spinach)
- 50s ribosomal protein l21, chloroplastic (18 kDa, Protein from Spinach)
- 50s ribosomal protein l33, chloroplastic (7 kDa, Protein from Spinach)
Boerema AP, Aibara S, Paul B, Tobiasson V, Kimanius D, Forsberg BO, Wallden K, Lindahl E, Amunts A
Nat Plants (2018) 4 pp. 212-217 [ Pubmed: 29610536 DOI: doi:10.1038/s41477-018-0129-6 ]
Boerema AP, Aibara S, Paul B, Tobiasson V, Kimanius D, Forsberg BO, Wallden K, Lindahl E, Amunts A
Nat Plants (2018) 4 pp. 212-217 [ Pubmed: 29610536 DOI: doi:10.1038/s41477-018-0129-6 ]
Time-resolved cryo electron microscopy map of the RRF-bound post-termination ribosome complex
Fu Z, Kaledhonkar S, Borg A, Sun M, Chen B, Grassucci RA, Ehrenberg M, Frank J
Structure (2016) 24 pp. 2092-2101 [ Pubmed: 27818103 DOI: doi:10.1016/j.str.2016.09.014 ]
- 70s ribosome-rrf-trna-mrna complex (2 MDa, Complex)
- Rrf (Complex from Escherichia coli)
- Mrna (Complex from Escherichia coli)
- P/e site trna phenylalanine (Complex from Escherichia coli)
Time-resolved cryo electron microscopy map of the RRF-bound post-termination ribosome complex
Fu Z, Kaledhonkar S, Borg A, Sun M, Chen B, Grassucci RA, Ehrenberg M, Frank J
Structure (2016) 24 pp. 2092-2101 [ Pubmed: 27818103 DOI: doi:10.1016/j.str.2016.09.014 ]
- 70s ribosome (Complex from Escherichia coli)
- Rrf (Complex from Escherichia coli)
- Mrna (Complex from Escherichia coli)
- 70s ribosome-rrf-mrna complex (2 MDa, Complex)