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sample_name:"Nog1-TAP associated immature ribosomal particles from cells depleted of rpL2."

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EMD-12908

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Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population A

Release date: Nov. 3, 2021
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 7oht
Q-score: 0.245

Poll G, Pilsl M, Griesenbeck J, Tschochner H, Milkereit P

PLoS One (2021) 16 pp. e0252497-e0252497 [ DOI: doi:10.1371/journal.pone.0252497 Pubmed: 34813592 ]

Sample:

Ribosome biogenesis protein nsa2 (29 kDa, Protein from Baker's yeast)
60s ribosomal protein l7-a (27 kDa, Protein from Baker's yeast)
60s ribosomal protein l3 (43 kDa, Protein from Baker's yeast)
Ribosome assembly factor mrt4 (27 kDa, Protein from Baker's yeast)
Nog1-tap associated immature ribosomal particles from cells depleted of rpl2. (Complex from Saccharomyces cerevisiae S288C)
60s ribosomal protein l11-a (19 kDa, Protein from Baker's yeast)
5s rrna (38 kDa, RNA from Saccharomyces cerevisiae S288c)
60s ribosomal protein l33-a (12 kDa, Protein from Baker's yeast)
Zinc ion (65 Da, Ligand)
Eukaryotic translation initiation factor 6 (26 kDa, Protein from Baker's yeast)
60s ribosomal protein l32 (14 kDa, Protein from Baker's yeast)
60s ribosomal protein l21-a (18 kDa, Protein from Baker's yeast)
60s ribosomal protein l4-a (39 kDa, Protein from Baker's yeast)
Nucleolar gtp-binding protein 1 (74 kDa, Protein from Baker's yeast)
60s ribosomal protein l23-a (14 kDa, Protein from Baker's yeast)
60s ribosomal protein l9-a (21 kDa, Protein from Baker's yeast)
60s ribosomal protein l6-a (20 kDa, Protein from Baker's yeast)
60s ribosomal protein l18-a (20 kDa, Protein from Baker's yeast)
60s ribosomal protein l14-a (15 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein rlp24 (24 kDa, Protein from Baker's yeast)
60s ribosomal protein l16-a (22 kDa, Protein from Baker's yeast)
60s ribosomal protein l5 (33 kDa, Protein from Baker's yeast)
5.8s rrna (50 kDa, RNA from Saccharomyces cerevisiae S288C)
60s ribosomal protein l20-a (20 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein rpf2 (39 kDa, Protein from Baker's yeast)
Magnesium ion (24 Da, Ligand)
Nucleolar gtp-binding protein 2 (55 kDa, Protein from Baker's yeast)
Regulator of ribosome biosynthesis (23 kDa, Protein from Baker's yeast)
Ribosome assembly protein 4 (57 kDa, Protein from Baker's yeast)
25s rrna (1 MDa, RNA from Saccharomyces cerevisiae S288C)

[Show more]

EMD-12909

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Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population B

Release date: Nov. 3, 2021
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7ohu
Q-score: 0.347

Poll G, Pilsl M, Griesenbeck J, Tschochner H, Milkereit P

PLoS One (2021) 16 pp. e0252497-e0252497 [ DOI: doi:10.1371/journal.pone.0252497 Pubmed: 34813592 ]

Sample:

Ribosome biogenesis protein nsa2 (29 kDa, Protein from Baker's yeast)
60s ribosomal protein l7-a (27 kDa, Protein from Baker's yeast)
60s ribosomal protein l3 (43 kDa, Protein from Baker's yeast)
60s ribosomal protein l35-a (13 kDa, Protein from Baker's yeast)
60s ribosomal protein l17-a (20 kDa, Protein from Baker's yeast)
Ribosome assembly factor mrt4 (27 kDa, Protein from Baker's yeast)
Nog1-tap associated immature ribosomal particles from cells depleted of rpl2. (Complex from Saccharomyces cerevisiae S288C)
60s ribosomal protein l33-a (12 kDa, Protein from Baker's yeast)
Zinc ion (65 Da, Ligand)
60s ribosomal protein l15-a (24 kDa, Protein from Baker's yeast)
Eukaryotic translation initiation factor 6 (26 kDa, Protein from Baker's yeast)
60s ribosomal protein l13-a (22 kDa, Protein from Baker's yeast)
60s ribosomal protein l32 (14 kDa, Protein from Baker's yeast)
60s ribosomal protein l8-a (28 kDa, Protein from Baker's yeast)
60s ribosomal protein l4-a (39 kDa, Protein from Baker's yeast)
Nucleolar gtp-binding protein 1 (74 kDa, Protein from Baker's yeast)
60s ribosomal protein l23-a (14 kDa, Protein from Baker's yeast)
5.8s rrna (50 kDa, RNA from Saccharomyces cerevisiae S288c)
60s ribosomal protein l9-a (21 kDa, Protein from Baker's yeast)
60s ribosomal protein l6-a (20 kDa, Protein from Baker's yeast)
60s ribosomal protein l37-a (9 kDa, Protein from Baker's yeast)
60s ribosomal protein l18-a (20 kDa, Protein from Baker's yeast)
60s ribosomal protein l14-a (15 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein rlp24 (24 kDa, Protein from Baker's yeast)
60s ribosomal protein l16-a (22 kDa, Protein from Baker's yeast)
60s ribosomal protein l20-a (20 kDa, Protein from Baker's yeast)
60s ribosomal protein l36-a (11 kDa, Protein from Baker's yeast)
25s rrna (1 MDa, RNA from Saccharomyces cerevisiae S288C)
60s ribosomal protein l26-a (14 kDa, Protein from Baker's yeast)

[Show more]

EMD-12910

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Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down, population C

Release date: Nov. 3, 2021
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7ohv
Q-score: 0.324

Poll G, Pilsl M, Griesenbeck J, Tschochner H, Milkereit P

PLoS One (2021) 16 pp. e0252497-e0252497 [ DOI: doi:10.1371/journal.pone.0252497 Pubmed: 34813592 ]

Sample:

60s ribosomal protein l7-a (27 kDa, Protein from Baker's yeast)
27s pre-rrna (guanosine(2922)-2'-o)-methyltransferase (96 kDa, Protein from Baker's yeast)
60s ribosomal protein l3 (43 kDa, Protein from Baker's yeast)
60s ribosomal protein l35-a (13 kDa, Protein from Baker's yeast)
60s ribosomal protein l31-a (12 kDa, Protein from Baker's yeast)
60s ribosomal protein l17-a (20 kDa, Protein from Baker's yeast)
Ribosome assembly factor mrt4 (27 kDa, Protein from Baker's yeast)
Nog1-tap associated immature ribosomal particles from cells depleted of rpl2. (Complex from Saccharomyces cerevisiae S288C)
Rrna-processing protein ebp2 (49 kDa, Protein from Baker's yeast)
60s ribosomal protein l33-a (12 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein ytm1 (51 kDa, Protein from Baker's yeast)
Zinc ion (65 Da, Ligand)
60s ribosomal protein l15-a (24 kDa, Protein from Baker's yeast)
Eukaryotic translation initiation factor 6 (26 kDa, Protein from Baker's yeast)
60s ribosomal protein l13-a (22 kDa, Protein from Baker's yeast)
60s ribosomal protein l32 (14 kDa, Protein from Baker's yeast)
60s ribosomal protein l8-a (28 kDa, Protein from Baker's yeast)
Proteasome-interacting protein cic1 (42 kDa, Protein from Baker's yeast)
Pescadillo homolog (69 kDa, Protein from Baker's yeast)
60s ribosomal protein l4-a (39 kDa, Protein from Baker's yeast)
60s ribosomal protein l19-a (21 kDa, Protein from Baker's yeast)
Atp-dependent rna helicase has1 (56 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein brx1 (33 kDa, Protein from Baker's yeast)
60s ribosomal protein l22-a (13 kDa, Protein from Baker's yeast)
Nucleolar gtp-binding protein 1 (74 kDa, Protein from Baker's yeast)
60s ribosomal protein l23-a (14 kDa, Protein from Baker's yeast)
5.8s rrna (50 kDa, RNA from Saccharomyces cerevisiae S288c)
Its2 (74 kDa, RNA from Saccharomyces cerevisiae S288C)
60s ribosomal protein l9-a (21 kDa, Protein from Baker's yeast)
60s ribosomal protein l6-a (20 kDa, Protein from Baker's yeast)
60s ribosomal protein l37-a (9 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein 15 (25 kDa, Protein from Baker's yeast)
25s rrna (1 MDa, RNA from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
60s ribosomal protein l18-a (20 kDa, Protein from Baker's yeast)
60s ribosomal protein l14-a (15 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein rlp24 (24 kDa, Protein from Baker's yeast)
60s ribosomal protein l16-a (22 kDa, Protein from Baker's yeast)
60s ribosomal protein l25 (15 kDa, Protein from Baker's yeast)
60s ribosomal protein l20-a (20 kDa, Protein from Baker's yeast)
60s ribosomal protein l38 (8 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein rlp7 (36 kDa, Protein from Baker's yeast)
60s ribosomal protein l28 (16 kDa, Protein from Baker's yeast)
Nucleolar protein 16 (26 kDa, Protein from Baker's yeast)
60s ribosomal protein l36-a (11 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein erb1 (91 kDa, Protein from Baker's yeast)
Ribosome biogenesis protein nsa2 (29 kDa, Protein from Baker's yeast)
60s ribosomal protein l27-a (15 kDa, Protein from Baker's yeast)
60s ribosomal protein l26-a (14 kDa, Protein from Baker's yeast)

[Show more]

Sort by: Download

Showing 1 - 3 of 3. Page 1 of 1

Display: Statistics

Download

Select database:

EMDB [3]

Format:

Select the script type:

Shell (Unix-based) Batch (Windows-based)

Preview first 10

Field: