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PhiCb5 maturation protein with Caulobacter crescentus bNY30a pili
Resolution: 6.45 Å
EM Method: Single-particle
Fitted PDBs: 8ucr
Q-score: 0.158
Wang Y, Theodore M, Xing Z, Narsaria U, Yu Z, Zeng L, Zhang J
Sci Adv (2024) 10 pp. eadl4450-eadl4450 [ DOI: doi:10.1126/sciadv.adl4450 Pubmed: 38701202 ]
- Maturation protein (40 kDa, Protein from Caulobacter phage phiCb5)
- A complex of pilus and phicb5 maturation protein (210 kDa, Complex from Caulobacter vibrioides)
- Flp family type ivb pilin (4 kDa, Protein from Caulobacter vibrioides)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8uej
Q-score: 0.449
Wang Y, Theodore M, Xing Z, Narsaria U, Yu Z, Zeng L, Zhang J
Sci Adv (2024) 10 pp. eadl4450-eadl4450 [ DOI: doi:10.1126/sciadv.adl4450 Pubmed: 38701202 ]
- Maturation protein (40 kDa, Protein from Caulobacter phage phiCb5)
- Coat protein (13 kDa, Protein from Caulobacter phage phiCb5)
- A complex of phicb5 maturation protein and phicb5 shell (2 MDa, Complex from Caulobacter vibrioides)
- Calcium ion (40 Da, Ligand)
Type IV pilus from Pseudomonas PAO1 strain with PP7 Maturation protein
Resolution: 7.9 Å
EM Method: Single-particle
Fitted PDBs: 8tuw
Q-score: 0.087
Thongchol J, Yu Z, Harb L, Lin Y, Koch M, Theodore M, Narsaria U, Shaevitz J, Gitai Z, Wu Y, Zhang J, Zeng L
Science (2024) 384 pp. eadl0635-eadl0635 [ DOI: doi:10.1126/science.adl0635 Pubmed: 38574145 ]
- Type iv major pilin protein pila (14 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Maturation protein a (50 kDa, Protein from Pseudomonas phage PP7)
- Type iv twitching pilus (240 kDa, Cellular component from Pseudomonas aeruginosa)
Resolution: 3.11 Å
EM Method: Single-particle
Fitted PDBs: 8toc
Q-score: 0.354
Meng R, Xing Z, Chang JY, Yu Z, Thongchol J, Xiao W, Wang Y, Chamakura K, Zeng Z, Wang F, Young R, Zeng L, Zhang J
Nat Commun (2024) 15 pp. 2746-2746 [ Pubmed: 38553443 DOI: doi:10.1038/s41467-024-47119-5 ]
- Coat protein (13 kDa, Protein from Acinetobacter phage AP205)
- Maturation protein (61 kDa, Protein from Acinetobacter phage AP205)
- Acinetobacter phage ap205 (3 MDa, Virus from Acinetobacter phage AP205)
- Rna (4269-mer) (1 MDa, RNA from Bacteria abnormis)
Resolution: 8.15 Å
EM Method: Single-particle
Fitted PDBs: 8tv9
Q-score: 0.081
Meng R, Xing Z, Chang JY, Yu Z, Thongchol J, Xiao W, Wang Y, Chamakura K, Zeng Z, Wang F, Young R, Zeng L, Zhang J
Nat Commun (2024) 15 pp. 2746-2746 [ Pubmed: 38553443 DOI: doi:10.1038/s41467-024-47119-5 ]
- Fimbrial protein (7 kDa, Protein from Acinetobacter genomosp. 16BJ)
- Fimbrial protein (6 kDa, Protein from Acinetobacter genomosp. 16BJ)
- Maturation protein (61 kDa, Protein from Acinetobacter phage AP205)
- Acinetobacter phage ap205 (378 kDa, Virus from Acinetobacter phage AP205)
Resolution: 8.55 Å
EM Method: Single-particle
Fitted PDBs: 8tva
Q-score: 0.054
Meng R, Xing Z, Chang JY, Yu Z, Thongchol J, Xiao W, Wang Y, Chamakura K, Zeng Z, Wang F, Young R, Zeng L, Zhang J
Nat Commun (2024) 15 pp. 2746-2746 [ Pubmed: 38553443 DOI: doi:10.1038/s41467-024-47119-5 ]
- Fimbrial protein (7 kDa, Protein from Acinetobacter genomosp. 16BJ)
- Fimbrial protein (6 kDa, Protein from Acinetobacter genomosp. 16BJ)
- Maturation protein (61 kDa, Protein from Acinetobacter phage AP205)
- Acinetobacter phage ap205 (378 kDa, Virus from Acinetobacter phage AP205)
Human 20S proteasome assembly structure 1
Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 8qyj
Q-score: 0.602
Adolf F, Du J, Goodall EA, Walsh Jr RM, Rawson S, von Gronau S, Harper JW, Hanna J, Schulman BA
Nat Struct Mol Biol (2024) [ Pubmed: 38600324 DOI: doi:10.1038/s41594-024-01268-9 ]
- Proteasome maturation protein (15 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 1 (32 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 4 (13 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-7 (27 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 3 (13 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-3 (28 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-6 (27 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-7 (34 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-2 (25 kDa, Protein from Homo sapiens)
- Human 20s proteasome assembly intermediate map 1 (Complex from Homo sapiens)
- Proteasome assembly chaperone 2 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-5 (26 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-1 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-4 (29 kDa, Protein from Homo sapiens)
Human 20S proteasome assembly intermediate structure 2
Resolution: 2.67 Å
EM Method: Single-particle
Fitted PDBs: 8qyl
Q-score: 0.601
Adolf F, Du J, Goodall EA, Walsh Jr RM, Rawson S, von Gronau S, Harper JW, Hanna J, Schulman BA
Nat Struct Mol Biol (2024) [ Pubmed: 38600324 DOI: doi:10.1038/s41594-024-01268-9 ]
- Proteasome maturation protein (15 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-7 (35 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 1 (32 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-7 (27 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-3 (28 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-6 (27 kDa, Protein from Homo sapiens)
- Human 20s proteasome assembly intermediate map 2 (Complex from Homo sapiens)
- Proteasome subunit alpha type-2 (25 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 2 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-5 (26 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-1 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-3 (22 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-4 (29 kDa, Protein from Homo sapiens)
Human 20S proteasome assembly intermediate structure 3
Resolution: 2.73 Å
EM Method: Single-particle
Fitted PDBs: 8qym
Q-score: 0.595
Adolf F, Du J, Goodall EA, Walsh Jr RM, Rawson S, von Gronau S, Harper JW, Hanna J, Schulman BA
Nat Struct Mol Biol (2024) [ Pubmed: 38600324 DOI: doi:10.1038/s41594-024-01268-9 ]
- Proteasome maturation protein (15 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 1 (32 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-7 (27 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-2 (22 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-3 (28 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-6 (27 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-2 (25 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 2 (29 kDa, Protein from Homo sapiens)
- Human 20s proteasome assembly intermediate map 3 (Complex from Homo sapiens)
- Proteasome subunit alpha type-5 (26 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-1 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-3 (22 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-7 (35 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-4 (29 kDa, Protein from Homo sapiens)
Human 20S proteasome assembly intermediate structure 5
Resolution: 2.88 Å
EM Method: Single-particle
Fitted PDBs: 8qyn
Q-score: 0.571
Adolf F, Du J, Goodall EA, Walsh Jr RM, Rawson S, von Gronau S, Harper JW, Hanna J, Schulman BA
Nat Struct Mol Biol (2024) [ Pubmed: 38600324 DOI: doi:10.1038/s41594-024-01268-9 ]
- Human 20s proteasome assembly intermediate map 5 (Complex from Homo sapiens)
- Proteasome subunit beta type-7 (35 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 1 (32 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-7 (27 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-3 (28 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-6 (27 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-2 (25 kDa, Protein from Homo sapiens)
- Proteasome assembly chaperone 2 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-6 (25 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-5 (26 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-1 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-3 (22 kDa, Protein from Homo sapiens)
- Proteasome maturation protein (15 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-1 (26 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-4 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit alpha type-4 (29 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-2 (22 kDa, Protein from Homo sapiens)
- Proteasome subunit beta type-5 (28 kDa, Protein from Homo sapiens)