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LH2-LH3 antenna in antiparallel configuration embedded in a nanodisc
Resolution: 6.4 Å
EM Method: Single-particle
Fitted PDBs: 8fb9
Q-score: 0.164
Wang D, Fiebig OC, Harris D, Toporik H, Ji Y, Chuang C, Nairat M, Tong AL, Ogren JI, Hart SM, Cao J, Sturgis JN, Mazor Y, Schlau-Cohen GS
PNAS (2023) 120 pp. e2220477120-e2220477120 [ DOI: doi:10.1073/pnas.2220477120 Pubmed: 37399405 ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Lycopene (536 Da, Ligand)
- Light-harvesting protein b800-820 alpha chain (6 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b-800/850 beta 1 chain (5 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b800-820 beta chain (5 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b-800/850 alpha chain (5 kDa, Protein from Magnetospirillum molischianum)
- Lhii-lhiii complex in nanodisk (200 kDa, Complex from Magnetospirillum molischianum)
LH2-LH3 antenna in parallel configuration embedded in a nanodisc
Resolution: 11.3 Å
EM Method: Single-particle
Fitted PDBs: 8fbb
Q-score: 0.049
Wang D, Fiebig OC, Harris D, Toporik H, Ji Y, Chuang C, Nairat M, Tong AL, Ogren JI, Hart SM, Cao J, Sturgis JN, Mazor Y, Schlau-Cohen GS
PNAS (2023) 120 pp. e2220477120-e2220477120 [ DOI: doi:10.1073/pnas.2220477120 Pubmed: 37399405 ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Lycopene (536 Da, Ligand)
- Light-harvesting protein b800-820 alpha chain (6 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b-800/850 beta 1 chain (5 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b800-820 beta chain (5 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b-800/850 alpha chain (5 kDa, Protein from Magnetospirillum molischianum)
- Lhii-lhiii complex in nanodisk (200 kDa, Complex from Magnetospirillum molischianum)
LH2-LH3 antenna in anti parallel configuration embedded in a nanodisc
Resolution: 8.2 Å
EM Method: Single-particle
Fitted PDBs: 7tuw
Q-score: 0.18
Wang D, Fiebig OC, Harris D, Toporik H, Ji Y, Chuang C, Nairat M, Tong AL, Ogren JI, Hart SM, Cao J, Sturgis JN, Mazor Y, Schlau-Cohen GS
PNAS (2023) 120 pp. e2220477120-e2220477120 [ DOI: doi:10.1073/pnas.2220477120 Pubmed: 37399405 ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Light-harvesting protein b800-820 beta chain (5 kDa, Protein from Magnetospirillum molischianum)
- Lycopene (536 Da, Ligand)
- Lh2 and lh3 antennae (Complex from Magnetospirillum molischianum)
- Light-harvesting protein b-800/850 alpha chain (6 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b800-820 alpha chain (6 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b-800/850 beta 1 chain (5 kDa, Protein from Magnetospirillum molischianum)
LH2-LH3 antenna in parallel configuration embedded in a nanodisc
Resolution: 11.4 Å
EM Method: Single-particle
Fitted PDBs: 7tv3
Q-score: 0.084
Wang D, Fiebig OC, Harris D, Toporik H, Ji Y, Chuang C, Nairat M, Tong AL, Ogren JI, Hart SM, Cao J, Sturgis JN, Mazor Y, Schlau-Cohen GS
PNAS (2023) 120 pp. e2220477120-e2220477120 [ DOI: doi:10.1073/pnas.2220477120 Pubmed: 37399405 ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Light-harvesting protein b800-820 beta chain (5 kDa, Protein from Magnetospirillum molischianum)
- Lycopene (536 Da, Ligand)
- Lh2 and lh3 antennae (Complex from Magnetospirillum molischianum)
- Light-harvesting protein b-800/850 alpha chain (6 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b800-820 alpha chain (6 kDa, Protein from Magnetospirillum molischianum)
- Light-harvesting protein b-800/850 beta 1 chain (4 kDa, Protein from Magnetospirillum molischianum)
PucA-LH2 complex from Rps. palustris
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7zcu
Q-score: 0.612
Qian P, Nguyen-Phan CT, Gardiner AT, Croll TI, Roszak AW, Southall J, Jackson PJ, Vasilev C, Castro-Hartmann P, Sader K, Hunter CN, Cogdell RJ
PNAS (2022) 119 pp. e2210109119-e2210109119 [ DOI: doi:10.1073/pnas.2210109119 Pubmed: 36251992 ]
- Puca-lh2 from rps. palustris (Complex from Rhodopseudomonas palustris ATCC 17001)
- Bacteriochlorophyll a (911 Da, Ligand)
- Puca-lh2-gamma (10 kDa, Protein from Rhodopseudomonas palustris ATCC 17001)
- Light-harvesting protein b-800-850 alpha chain (6 kDa, Protein from Rhodopseudomonas palustris ATCC 17001)
- Water (18 Da, Ligand)
- 1,2-dihydro-psi,psi-caroten-1-ol (554 Da, Ligand)
- Light-harvesting protein b-800-850 beta chain (5 kDa, Protein from Rhodopseudomonas palustris ATCC 17001)
PucD-LH2 complex from Rps. palustris
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7ze3
Q-score: 0.614
Qian P, Nguyen-Phan CT, Gardiner AT, Croll TI, Roszak AW, Southall J, Jackson PJ, Vasilev C, Castro-Hartmann P, Sader K, Hunter CN, Cogdell RJ
PNAS (2022) 119 pp. e2210109119-e2210109119 [ DOI: doi:10.1073/pnas.2210109119 Pubmed: 36251992 ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Light-harvesting protein b-800-850 beta chain (5 kDa, Protein from Rhodopseudomonas palustris)
- Puca-lh2-gamma (10 kDa, Protein from Rhodopseudomonas palustris)
- Water (18 Da, Ligand)
- (3'e)-3',4'-didehydro-1,2-dihydro-psi,psi-caroten-1-ol (552 Da, Ligand)
- Light-harvesting protein b-800-850 alpha chain (6 kDa, Protein from Rhodopseudomonas palustris)
- Pucd-lh2 from rps. palustris (Complex from Rhodopseudomonas palustris ATCC 17001)
Cryo-EM structure of light harvesting complex 2 from Rba. sphaeroides.
Resolution: 2.1 Å
EM Method: Single-particle
Fitted PDBs: 7pbw
Q-score: 0.76
Qian P, Swainsbury DJK, Croll TI, Castro-Hartmann P, Divitini G, Sader K, Hunter CN
Biochemistry (2021) 60 pp. 3302-3314 [ Pubmed: 34699186 DOI: doi:10.1021/acs.biochem.1c00576 ]
- Bacteriochlorophyll a (911 Da, Ligand)
- Calcium ion (40 Da, Ligand)
- Light-harvesting protein b-800/850 beta chain (4 kDa, Protein from Cereibacter sphaeroides 2.4.1)
- Light-harvesting protein b-800/850 alpha chain (5 kDa, Protein from Cereibacter sphaeroides 2.4.1)
- Light harvesting complex 2 (123 kDa, Complex from Cereibacter sphaeroides 2.4.1)
- Lauryl dimethylamine-n-oxide (229 Da, Ligand)
- Water (18 Da, Ligand)
- Spheroidene (568 Da, Ligand)