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Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8e2x
Q-score: 0.54
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp4 (7 kDa, Protein from Human enterovirus 71)
- Sphingosine (299 Da, Ligand)
- Vp2 (27 kDa, Protein from Human enterovirus 71)
- Vp1 (32 kDa, Protein from Human enterovirus 71)
- Vp3 (26 kDa, Protein from Human enterovirus 71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 8.0 Å
EM Method: Single-particle
Fitted PDBs: 8e2y
Q-score: 0.148
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp1 (25 kDa, Protein from Enterovirus A71)
- Genome polyprotein (25 kDa, Protein from Enterovirus A71)
- Vp2 (25 kDa, Protein from Enterovirus A71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 14.0 Å
EM Method: Single-particle
Fitted PDBs: 8e31
Q-score: 0.084
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Genome polyprotein (24 kDa, Protein from Enterovirus A71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp1 (25 kDa, Protein from Enterovirus A71)
- Vp3 (23 kDa, Protein from Enterovirus A71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 8e38
Q-score: 0.363
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp1 (32 kDa, Protein from Human enterovirus 71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp4 (7 kDa, Protein from Human enterovirus 71)
- Sphingosine (299 Da, Ligand)
- Vp2 (27 kDa, Protein from Human enterovirus 71)
- Vp3 (26 kDa, Protein from Human enterovirus 71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8e39
Q-score: 0.576
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp1 (32 kDa, Protein from Human enterovirus 71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp4 (7 kDa, Protein from Human enterovirus 71)
- Sphingosine (299 Da, Ligand)
- Vp2 (27 kDa, Protein from Human enterovirus 71)
- Vp3 (26 kDa, Protein from Human enterovirus 71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 7.4 Å
EM Method: Single-particle
Fitted PDBs: 8e3a
Q-score: 0.225
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp1 (32 kDa, Protein from Human enterovirus 71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp4 (7 kDa, Protein from Human enterovirus 71)
- Vp2 (27 kDa, Protein from Human enterovirus 71)
- Vp3 (26 kDa, Protein from Human enterovirus 71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 8e3b
Q-score: 0.336
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp3 (25 kDa, Protein from Enterovirus A71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp1 (25 kDa, Protein from Enterovirus A71)
- Vp2 (25 kDa, Protein from Enterovirus A71)
Purification of Enterovirus A71, strain 4643, WT capsid
Resolution: 7.1 Å
EM Method: Single-particle
Fitted PDBs: 8e3c
Q-score: 0.144
Catching A, Te Yeh M, Bianco S, Capponi S, Andino R
Nat Commun (2023) 14 pp. 7450-7450 [ DOI: doi:10.1038/s41467-023-43029-0 Pubmed: 37978288 ]
- Vp3 (25 kDa, Protein from Enterovirus A71)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Vp1 (25 kDa, Protein from Enterovirus A71)
- Vp2 (25 kDa, Protein from Enterovirus A71)
Structure of Enterovirus 71 in complex with NLD-22
Resolution: 3.264 Å
EM Method: Single-particle
Fitted PDBs: 6lqd
Q-score: 0.56
Zhang M, Wang Y, He W, Sun Y, Guo Y, Zhong W, Gao Q, Liao M, Wang X, Cai Y, Guo Y, Rao Z
J Med Chem (2020) 63 pp. 1233-1244 [ DOI: doi:10.1021/acs.jmedchem.9b01414 Pubmed: 31939669 ]
- Capsid protein vp2 (27 kDa, Protein from Human enterovirus 71)
- 1-(2-azanylpyridin-4-yl)-3-[5-[4-(5-methyl-1,2,4-oxadiazol-3-yl)phenoxy]pentyl]imidazolidin-2-one (422 Da, Ligand)
- Human enterovirus 71 (Virus from Human enterovirus 71)
- Capsid protein vp1 (32 kDa, Protein from Human enterovirus 71)
- Capsid protein vp4 (7 kDa, Protein from Human enterovirus 71)
- Capsid protein vp3 (26 kDa, Protein from Human enterovirus 71)
The cryoEM map of EV71 mature viron in complex with intact antibody D5
Resolution: 7.2 Å
EM Method: Single-particle
Fitted PDBs: 3jau
Q-score: 0.088
Ye XH, Fan C, Ku ZQ, Zuo T, Kong LL, Zhang C, Shi JP, Liu QW, Chen T, Zhang YY, Jiang W, Zhang LQ, Huang Z, Cong Y
PLoS Pathog (2016) 12 pp. e1005454-e1005454 [ Pubmed: 26938634 DOI: doi:10.1371/journal.ppat.1005454 ]
- Human enterovirus 71 (5 MDa, Virus from Human enterovirus 71)
- Antibody d5 (Protein from Homo sapiens)
- Ev71 mature viron in complex with intact antibody d5 (8 MDa, Sample)