Do data resources managed by EMBL-EBI and our collaborators make a difference to your work? Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.
CryoEM structure of non-structural protein 1 tetramer from ZIKA virus
Cryo-EM structure of the NS5-SLA complex
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8gzp
Q-score: 0.486
Osawa T, Aoki M, Ehara H, Sekine SI
Mol Cell (2023) 83 pp. 2781- [ Pubmed: 37478848 DOI: doi:10.1016/j.molcel.2023.06.023 ]
- Rna replicase complex bound to the mini-genome rna (Complex from Dengue virus)
- Magnesium ion (24 Da, Ligand)
- Rna (54 kDa, RNA from synthetic construct)
- Genome polyprotein (104 kDa, Protein from Dengue virus)
- Mini-genome rna (Complex from synthetic construct)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Ns5 (Complex from Dengue virus)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of the NS5-NS3-SLA complex
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8gzq
Q-score: 0.429
Osawa T, Aoki M, Ehara H, Sekine SI
Mol Cell (2023) 83 pp. 2781- [ Pubmed: 37478848 DOI: doi:10.1016/j.molcel.2023.06.023 ]
- Genome polyprotein (74 kDa, Protein from Dengue virus)
- Rna replicase complex bound to the mini-genome rna (Complex from Dengue virus)
- Ns3 (Complex from Dengue virus)
- Rna (54 kDa, RNA from synthetic construct)
- Genome polyprotein (104 kDa, Protein from Dengue virus)
- Mini-genome rna (Complex from synthetic construct)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Ns5 (Complex from Dengue virus)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of the the NS5-NS3 RNA-elongation complex
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8gzr
Q-score: 0.638
Osawa T, Aoki M, Ehara H, Sekine SI
Mol Cell (2023) 83 pp. 2781- [ Pubmed: 37478848 DOI: doi:10.1016/j.molcel.2023.06.023 ]
- Genome polyprotein (74 kDa, Protein from Dengue virus)
- Rna (12 kDa, RNA from synthetic construct)
- Ns3 (Complex from Dengue virus)
- Manganese (ii) ion (54 Da, Ligand)
- Genome polyprotein (104 kDa, Protein from Dengue virus)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
- Cytidine-5'-diphosphate (403 Da, Ligand)
- Rna (Complex from synthetic construct)
- Ns5 (Complex from Dengue virus)
- Zinc ion (65 Da, Ligand)
- Ns5-ns3 rna-elongation complex (Complex from Dengue virus)
Cryo-EM structure of compact CA16 empty particle in complex with a neutralizing antibody 8C4
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 7yrf
Q-score: 0.433
Zhang C, Liu C, Shi J, Wang Y, Xu C, Ye X, Liu Q, Li X, Qiao W, Yin Y, Cong Y, Huang Z
Nat Commun (2022) 13 pp. 7854-7854 [ Pubmed: 36543790 DOI: doi:10.1038/s41467-022-35575-w ]
- The heavy chain of the antibody 8c4 (22 kDa, Protein from Coxsackievirus A16)
- Light chain of chain (23 kDa, Protein from Coxsackievirus A16)
- Capsid protein vp3 (26 kDa, Protein from Coxsackievirus A16)
- Cryo-em structure of compact ca16 empty particle in complex with a neutralizing antibody 8c4 (Complex from Coxsackievirus A16)
- Genome polyprotein (25 kDa, Protein from Coxsackievirus A16)
- Genome polyprotein (33 kDa, Protein from Coxsackievirus A16)
- Sphingosine (299 Da, Ligand)