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Cryo-EM structure of Spondweni virus prME
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 6zqi
Q-score: 0.424
Renner M, Dejnirattisai W, Carrique L, Martin IS, Karia D, Ilca SL, Ho SF, Kotecha A, Keown JR, Mongkolsapaya J, Screaton GR, Grimes JM
Nat Commun (2021) 12 pp. 1238-1238 [ DOI: doi:10.1038/s41467-021-21505-9 Pubmed: 33623019 ]
- Genome polyprotein (54 kDa, Protein from Spondweni virus)
- Spondweni virus (Virus from Spondweni virus)
- Genome polyprotein (19 kDa, Protein from Spondweni virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of trimeric prME spike of Spondweni virus
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 6zqj
Q-score: 0.342
Renner M, Dejnirattisai W, Carrique L, Martin IS, Karia D, Ilca SL, Ho SF, Kotecha A, Keown JR, Mongkolsapaya J, Screaton GR, Grimes JM
Nat Commun (2021) 12 pp. 1238-1238 [ DOI: doi:10.1038/s41467-021-21505-9 Pubmed: 33623019 ]
- Prm (19 kDa, Protein from Spondweni virus)
- Genome polyprotein (54 kDa, Protein from Spondweni virus)
- Spondweni virus (Virus from Spondweni virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of mature Dengue virus 2 at 3.1 angstrom resolution
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6zqu
Q-score: 0.488
Renner M, Dejnirattisai W, Carrique L, Martin IS, Karia D, Ilca SL, Ho SF, Kotecha A, Keown JR, Mongkolsapaya J, Screaton GR, Grimes JM
Nat Commun (2021) 12 pp. 1238-1238 [ DOI: doi:10.1038/s41467-021-21505-9 Pubmed: 33623019 ]
- Dengue virus 2 (Virus from Dengue virus 2)
- Genome polyprotein (54 kDa, Protein from Dengue virus 2)
- Genome polyprotein (8 kDa, Protein from Dengue virus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Cryo-EM structure of mature Spondweni virus
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 6zqv
Q-score: 0.625
Renner M, Dejnirattisai W, Carrique L, Martin IS, Karia D, Ilca SL, Ho SF, Kotecha A, Keown JR, Mongkolsapaya J, Screaton GR, Grimes JM
Nat Commun (2021) 12 pp. 1238-1238 [ DOI: doi:10.1038/s41467-021-21505-9 Pubmed: 33623019 ]
- Genome polyprotein (8 kDa, Protein from Spondweni virus)
- Genome polyprotein (54 kDa, Protein from Spondweni virus)
- Spondweni virus (Virus from Spondweni virus)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
Cryo-EM structure of immature Spondweni virus
Resolution: 7.8 Å
EM Method: Single-particle
Fitted PDBs: 6zqw
Q-score: 0.154
Renner M, Dejnirattisai W, Carrique L, Martin IS, Karia D, Ilca SL, Ho SF, Kotecha A, Keown JR, Mongkolsapaya J, Screaton GR, Grimes JM
Nat Commun (2021) 12 pp. 1238-1238 [ DOI: doi:10.1038/s41467-021-21505-9 Pubmed: 33623019 ]
- Prm (19 kDa, Protein from Spondweni virus)
- Genome polyprotein (54 kDa, Protein from Spondweni virus)
- Spondweni virus (Virus from Spondweni virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 5owx
Q-score: 0.291
Malik N, Kotecha A, Gold S, Asfor A, Ren J, Huiskonen JT, Tuthill TJ, Fry EE, Stuart DI
PLoS Pathog (2017) 13 pp. e1006607-e1006607 [ DOI: doi:10.1371/journal.ppat.1006607 Pubmed: 28937999 ]
- Genome polyprotein (24 kDa, Protein from Foot-and-mouth disease virus (strain A10-61))
- Genome polyprotein (20 kDa, Protein from Foot-and-mouth disease virus (strain A10-61))
- Genome polyprotein (20 kDa, Protein from Foot-and-mouth disease virus (strain A10-61))
- Foot-and-mouth disease virus (strain a10-61) (5 MDa, Virus from Foot-and-mouth disease virus (strain A10-61))
Resolution: 8.2 Å
EM Method: Single-particle
Fitted PDBs: 5oyi
Q-score: 0.161
Malik N, Kotecha A, Gold S, Asfor A, Ren J, Huiskonen JT, Tuthill TJ, Fry EE, Stuart DI
PLoS Pathog (2017) 13 pp. e1006607-e1006607 [ DOI: doi:10.1371/journal.ppat.1006607 Pubmed: 28937999 ]
- Genome polyprotein (20 kDa, Protein from Foot-and-mouth disease virus (strain A10-61))
- Genome polyprotein (24 kDa, Protein from Foot-and-mouth disease virus (strain A10-61))
- Genome polyprotein (20 kDa, Protein from Foot-and-mouth disease virus (strain A10-61))
- Foot-and-mouth disease virus (strain a10-61) (455 MDa, Virus from Foot-and-mouth disease virus (strain A10-61))
cryo-EM structure of human Aichi virus
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 5gka
Q-score: 0.487
Zhu L, Wang X, Ren J, Kotecha A, Walter TS, Yuan S, Yamashita T, Tuthill TJ, Fry EE, Rao Z, Stuart DI
Nat Microbiol (2016) 1 pp. 16150-16150 [ DOI: doi:10.1038/nmicrobiol.2016.150 Pubmed: 27595320 ]
- Aichi virus a846/88 (6 MDa, Virus from Aichi virus A846/88)
- Capsid protein vp1 (27 kDa, Protein from Aichi virus (strain Human/A846/88/1989))
- Capsid protein vp0 (38 kDa, Protein from Aichi virus (strain Human/A846/88/1989))
- Genome polyprotein (23 kDa, Protein from Aichi virus (strain Human/A846/88/1989))