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Structure of the immature HTLV-1 CA lattice from full-length Gag VLPs: CA-NTD refinement
Resolution: 5.9 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8pug
Q-score: 0.304
Obr M, Percipalle M, Chernikova D, Yang H, Thader A, Pinke G, Porley D, Mansky LM, Dick RA, Schur FK
bioRxiv (2023) [ DOI: doi:10.1101/2023.07.24.548988 Pubmed: 37546793 ]
Structure of the immature HTLV-1 CA lattice from full-length Gag VLPs: CA-CTD refinement
Resolution: 6.2 Å
EM Method: Subtomogram averaging
Fitted PDBs: 8puh
Q-score: 0.254
Obr M, Percipalle M, Chernikova D, Yang H, Thader A, Pinke G, Porley D, Mansky LM, Dick RA, Schur FK
bioRxiv (2023) [ DOI: doi:10.1101/2023.07.24.548988 Pubmed: 37546793 ]
HIV-1 mature capsid hexamer from CA-IP6 CLPs
Resolution: 2.89 Å
EM Method: Single-particle
Fitted PDBs: 8ckv
Q-score: 0.547
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Hiv-1 mature capsid (26 kDa, Complex from Human immunodeficiency virus 1)
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
HIV-1 mature capsid pentamer from CA-IP6 CLPs
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8ckw
Q-score: 0.515
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Hiv-1 mature capsid (26 kDa, Complex from Human immunodeficiency virus 1)
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
HIV-1 mature capsid hexamer next to pentamer (type I) from CA-IP6 CLPs
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 8ckx
Q-score: 0.522
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Hiv-1 mature capsid (26 kDa, Complex from Human immunodeficiency virus 1)
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to Nup153 peptide
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8cky
Q-score: 0.597
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Nuclear pore complex protein nup153 (1 kDa, Protein from Homo sapiens)
- Hiv-1 mature capsid (27 kDa, Complex from Human immunodeficiency virus 1)
HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Nup153 peptide
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 8ckz
Q-score: 0.522
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 mature capsid (27 kDa, Complex from Human immunodeficiency virus 1)
HIV-1 mature capsid hexamer next to pentamer (type I) from CA-IP6 CLPs bound to Nup153 peptide.
Resolution: 3.12 Å
EM Method: Single-particle
Fitted PDBs: 8cl0
Q-score: 0.522
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Nuclear pore complex protein nup153 (1 kDa, Protein from Homo sapiens)
- Hiv-1 mature capsid (27 kDa, Complex from Human immunodeficiency virus 1)
HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to CPSF6 peptide.
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 8cl1
Q-score: 0.462
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Cleavage and polyadenylation specificity factor subunit 6 (1 kDa, Protein from Homo sapiens)
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 mature capsid (27 kDa, Complex from Human immunodeficiency virus 1)
HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to CPSF6 peptide
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 8cl2
Q-score: 0.474
Stacey JCV, Tan A, Lu JM, James LC, Dick RA, Briggs JAG
PNAS (2023) 120 pp. e2220557120-e2220557120 [ DOI: doi:10.1073/pnas.2220557120 Pubmed: 37040417 ]
- Gag polyprotein (25 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 mature capsid (27 kDa, Complex from Human immunodeficiency virus 1)