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Echovirus3 A-particle in complex with 6D10 Fab
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 8gsc
Q-score: 0.47
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ Pubmed: 36366420 DOI: doi:10.3390/v14112322 ]
- Echovirus e3 (Virus from Echovirus E3)
- Vp3 (25 kDa, Protein from Echovirus E3)
- Echovirus3 a-particle in complex with 6d10 fab (Complex)
- Vp2 (27 kDa, Protein from Echovirus E3)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Vp1 (26 kDa, Protein from Echovirus E3)
- 6d10 fab (Complex from Mus musculus)
Echovirus3 full particle in complex with 6D10 Fab
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8gsd
Q-score: 0.556
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ Pubmed: 36366420 DOI: doi:10.3390/v14112322 ]
- Genome polyprotein (fragment) (32 kDa, Protein from Echovirus E3)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Echovirus e3 (Virus from Echovirus E3)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Echovirus3 full particle in complex with 6d10 fab (Complex)
- Genome polyprotein (29 kDa, Protein from Echovirus E3)
- Genome polyprotein (26 kDa, Protein from Echovirus E3)
- Sphingosine (299 Da, Ligand)
- 6d10 fab (Complex from Mus musculus)
- Genome polyprotein (fragment) (7 kDa, Protein from Echovirus E3)
Echovirus3 capsid protein in complex with 6D10 Fab (upright)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8gse
Q-score: 0.448
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ Pubmed: 36366420 DOI: doi:10.3390/v14112322 ]
- Echovirus e3 (Virus from Echovirus E3)
- Vp3 (25 kDa, Protein from Echovirus E3)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Vp0 (28 kDa, Protein from Echovirus E3)
- Vp1 (26 kDa, Protein from Echovirus E3)
- 6d10 fab (Complex from Mus musculus)
- Echovirus3 empty particle in complex with 6d10 fab (upright) (Complex)
Echovirus3 empty particle in complex with 6D10 Fab (sideling)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8gsf
Q-score: 0.445
Qi S, Fu W, Fan J, Zhang L, Zheng B, Wang K, Wang X, Zhu L, Li X, Zhang Y
Viruses (2022) 14 [ Pubmed: 36366420 DOI: doi:10.3390/v14112322 ]
- Echovirus e3 (Virus from Echovirus E3)
- Vp3 (25 kDa, Protein from Echovirus E3)
- Heavy chain of 6d10 (12 kDa, Protein from Mus musculus)
- Light chain of 6d10 (12 kDa, Protein from Mus musculus)
- Vp0 (28 kDa, Protein from Echovirus E3)
- Vp1 (26 kDa, Protein from Echovirus E3)
- Echovirus3 empty particle in complex with 6d10 fab (sideling) (Complex)
- 6d10 fab (Complex from Mus musculus)
Echovirus3 empty expanded particle
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7eah
Q-score: 0.576
Feng R, Wang L, Shi D, Zheng B, Zhang L, Hou H, Xia D, Cui L, Wang X, Xu S, Wang K, Zhu L
Cell Discov (2021) 7 pp. 35-35 [ DOI: doi:10.1038/s41421-021-00264-3 Pubmed: 34035235 ]
- Capsid protein vp3 (26 kDa, Protein from Echovirus E3)
- Capsid protein vp1 (32 kDa, Protein from Echovirus E3)
- Echovirus e3 (Virus from Echovirus E3)
- Capsid protein vp0 (36 kDa, Protein from Echovirus E3)
Echovirus3 empty compacted particle
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7eai
Q-score: 0.488
Feng R, Wang L, Shi D, Zheng B, Zhang L, Hou H, Xia D, Cui L, Wang X, Xu S, Wang K, Zhu L
Cell Discov (2021) 7 pp. 35-35 [ DOI: doi:10.1038/s41421-021-00264-3 Pubmed: 34035235 ]
- Echovirus e3 (Virus from Echovirus E3)
- Capsid protein vp0 (36 kDa, Protein from Echovirus E3)
- Sphingosine (299 Da, Ligand)
- Capsid protein vp3 (26 kDa, Protein from Echovirus E3)
- Capsid protein vp1 (32 kDa, Protein from Echovirus E3)
Echovirus3 empty expanded particle in complex with 5G3 fab
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7eaj
Q-score: 0.361
Feng R, Wang L, Shi D, Zheng B, Zhang L, Hou H, Xia D, Cui L, Wang X, Xu S, Wang K, Zhu L
Cell Discov (2021) 7 pp. 35-35 [ DOI: doi:10.1038/s41421-021-00264-3 Pubmed: 34035235 ]
- Vp1 (32 kDa, Protein from Echovirus E3)
- Heavy chain of 5g3 fab (12 kDa, Protein from Mus musculus)
- Fab (Complex from Mus musculus)
- Echovirus e3 (Complex from Echovirus E3)
- Light chain of 5g3 fab (12 kDa, Protein from Mus musculus)
- Vp3 (26 kDa, Protein from Echovirus E3)
- Echovirus e3 in complex with 5g3 fab (Complex)
- Vp0 (36 kDa, Protein from Echovirus E3)
Echovirus3 full particle in complex with 5G3 fab
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7eak
Q-score: 0.453
Feng R, Wang L, Shi D, Zheng B, Zhang L, Hou H, Xia D, Cui L, Wang X, Xu S, Wang K, Zhu L
Cell Discov (2021) 7 pp. 35-35 [ DOI: doi:10.1038/s41421-021-00264-3 Pubmed: 34035235 ]
- Capsid protein vp3 (26 kDa, Protein from Echovirus E3)
- Capsid protein vp4 (7 kDa, Protein from Echovirus E3)
- Heavy chain of 5g3 fab (12 kDa, Protein from Mus musculus)
- Myristic acid (228 Da, Ligand)
- Sphingosine (299 Da, Ligand)
- 5g3 fab (Complex from Mus musculus)
- Capsid protein vp2 (29 kDa, Protein from Echovirus E3)
- Echovirus e3 (Complex from Echovirus E3)
- Capsid protein vp1 (32 kDa, Protein from Echovirus E3)
- Light chain of 5g3 fab (12 kDa, Protein from Mus musculus)
- Echovirus e3 in complex with 5g3 fab (Complex)
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7c9x
Q-score: 0.562
Wang K, Zhu L, Sun Y, Li M, Zhao X, Cui L, Zhang L, Gao GF, Zhai W, Zhu F, Rao Z, Wang X
Nat Commun (2020) 11 pp. 4421-4421 [ Pubmed: 32887891 DOI: doi:10.1038/s41467-020-18251-9 ]
- Vp2 (29 kDa, Protein from Echovirus E3)
- Echovirus e3 (Virus from Echovirus E3)
- Myristic acid (228 Da, Ligand)
- Vp3 (26 kDa, Protein from Echovirus E3)
- Vp4 (7 kDa, Protein from Echovirus E3)
- Sphingosine (299 Da, Ligand)
- Vp1 (31 kDa, Protein from Echovirus E3)