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Antibody N3-1 bound to RBDs in the up and down conformations
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 8tm1
Q-score: 0.543
Goike J, Hsieh CL, Horton AP, Gardner EC, Zhou L, Bartzoka F, Wang N, Javanmardi K, Herbert A, Abbassi S, Xie X, Xia H, Shi PY, Renberg R, Segall-Shapiro TH, Terrace CI, Wu W, Shroff R, Byrom M, Ellington AD, Marcotte EM, Musser JM, Kuchipudi SV, Kapur V, Georgiou G, Weaver SC, Dye JM, Boutz DR, McLellan JS, Gollihar JD
Commun Biol (2023) 6 pp. 1250-1250 [ DOI: doi:10.1038/s42003-023-05649-6 Pubmed: 38082099 ]
- N3-1 fab heavy chain (14 kDa, Protein from Homo sapiens)
- Spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- N3-1 fab (Complex from Homo sapiens)
- The complex of n3-1 fab bound to two receptor binding domains of the spike (Complex)
- N3-1 fab light chain (11 kDa, Protein from Homo sapiens)
Antibody N3-1 bound to RBD in the up conformation
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8tma
Q-score: 0.501
Goike J, Hsieh CL, Horton AP, Gardner EC, Zhou L, Bartzoka F, Wang N, Javanmardi K, Herbert A, Abbassi S, Xie X, Xia H, Shi PY, Renberg R, Segall-Shapiro TH, Terrace CI, Wu W, Shroff R, Byrom M, Ellington AD, Marcotte EM, Musser JM, Kuchipudi SV, Kapur V, Georgiou G, Weaver SC, Dye JM, Boutz DR, McLellan JS, Gollihar JD
Commun Biol (2023) 6 pp. 1250-1250 [ DOI: doi:10.1038/s42003-023-05649-6 Pubmed: 38082099 ]
- N3-1 fab heavy chain (14 kDa, Protein from Homo sapiens)
- Spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- N3-1 fab (Complex from Homo sapiens)
- N3-1 fab light chain (11 kDa, Protein from Homo sapiens)
- The complex of n3-1 fab bound to one receptor binding domain of the spike (Complex)
Antibody N3-1 bound to SARS-CoV-2 spike
Goike J, Hsieh CL, Horton AP, Gardner EC, Zhou L, Bartzoka F, Wang N, Javanmardi K, Herbert A, Abbassi S, Xie X, Xia H, Shi PY, Renberg R, Segall-Shapiro TH, Terrace CI, Wu W, Shroff R, Byrom M, Ellington AD, Marcotte EM, Musser JM, Kuchipudi SV, Kapur V, Georgiou G, Weaver SC, Dye JM, Boutz DR, McLellan JS, Gollihar JD
Commun Biol (2023) 6 pp. 1250-1250 [ DOI: doi:10.1038/s42003-023-05649-6 Pubmed: 38082099 ]
- N3-1 (Complex from Homo sapiens)
- Sars-cov-2 spike (Protein from Severe acute respiratory syndrome coronavirus 2)
- N3-1 fab heavy chain (Protein from Homo sapiens)
- N3-1 fab light chain (Protein from Homo sapiens)
- Complex of n3-1 bound to sars-cov-2 spike (Complex)
- Sars-cov-2 spike (Complex from Severe acute respiratory syndrome coronavirus 2)
Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W
Structure (2020) 28 pp. 604-612.e3 [ Pubmed: 32049031 DOI: doi:10.1016/j.str.2020.01.011 ]
- Fako virus (43 MDa, Virus from Fako virus)
- Turret (Protein from Fako virus)
- Major capsid protein (Protein from Fako virus)
- Accessory ntpase (Protein from Fako virus)
- Clamp (Protein from Fako virus)
- Rna-dependent rna polymerase (Protein from Fako virus)
Fako virus full particles, icosahedral reconstruction
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6djy
Q-score: 0.454
Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W
To Be Published
- Major capsid protein (136 kDa, Protein from Fako virus)
- Fako virus (43 MDa, Virus from Fako virus)
- Clamp protein (39 kDa, Protein from Fako virus)
- Turret protein (121 kDa, Protein from Fako virus)
Fako virus empty particles, icosahedral reconstruction
Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W
To Be Published
- Turret protein (Protein from Fako virus)
- Clamp protein (Protein from Fako virus)
- Fako virus (43 MDa, Virus from Fako virus)
- Major capsid protein (Protein from Fako virus)
Fako virus empty particles, D2-symmetrized reconstruction
Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W
Structure (2020) 28 pp. 604-612.e3 [ Pubmed: 32049031 DOI: doi:10.1016/j.str.2020.01.011 ]
- Fako virus (43 MDa, Virus from Fako virus)
- Turret protein (Protein from Fako virus)
- Major capsid protein (Protein from Fako virus)
- Clamp protein (Protein from Fako virus)
- Polymerase accessory protein (Protein from Fako virus)
- Rna-dependent rna polymerase (Protein from Fako virus)
Fako virus full particles, D2-symmetrized reconstruction
Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W
Structure (2020) 28 pp. 604-612.e3 [ Pubmed: 32049031 DOI: doi:10.1016/j.str.2020.01.011 ]
- Fako virus (43 MDa, Virus from Fako virus)
- Turret protein (Protein from Fako virus)
- Major capsid protein (Protein from Fako virus)
- Clamp protein (Protein from Fako virus)
- Polymerase accessory protein (Protein from Fako virus)
- Rna-dependent rna polymerase (Protein from Fako virus)
Fako virus empty particles, projection-matching reconstruction without imposed symmetry
Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W
Structure (2020) 28 pp. 604-612.e3 [ Pubmed: 32049031 DOI: doi:10.1016/j.str.2020.01.011 ]
- Fako virus (43 MDa, Virus from Fako virus)
- Turret protein (Protein from Fako virus)
- Major capsid protein (Protein from Fako virus)
- Clamp protein (Protein from Fako virus)
- Polymerase accessory protein (Protein from Fako virus)
- Rna-dependent rna polymerase (Protein from Fako virus)
Fako virus full particles, projection-matching reconstruction without imposed symmetry
Kaelber JT, Jiang W, Weaver SC, Auguste AJ, Chiu W
Structure (2020) 28 pp. 604-612.e3 [ Pubmed: 32049031 DOI: doi:10.1016/j.str.2020.01.011 ]
- Fako virus (43 MDa, Virus from Fako virus)
- Turret protein (Protein from Fako virus)
- Major capsid protein (Protein from Fako virus)
- Clamp protein (Protein from Fako virus)
- Polymerase accessory protein (Protein from Fako virus)
- Rna-dependent rna polymerase (Protein from Fako virus)