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Fukawa E, Suzuki Y, Adachi T, Miyata T, Makino F, Tanaka H, Namba K, Sowa K, Kitazumi Y, Shirai O
Electrochim Acta (2024) 490 [ DOI: doi:10.1016/j.electacta.2024.144271 ]
- Fructose dehydrogenase small subunit (20 kDa, Protein from Gluconobacter japonicus)
- Fructose dehydrogenase cytochrome subunit (52 kDa, Protein from Gluconobacter japonicus)
- Heme c (618 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Fructose dehydrogenase (h1147a) large subunit (59 kDa, Protein from Gluconobacter japonicus)
- D-fructose dehydrogenase (h1147a) from gluconobacter japonicus (140 kDa, Complex from Gluconobacter japonicus)
- Fe3-s4 cluster (295 Da, Ligand)
- Flavin-adenine dinucleotide (785 Da, Ligand)
Fukawa E, Suzuki Y, Adachi T, Miyata T, Makino F, Tanaka H, Namba K, Sowa K, Kitazumi Y, Shirai O
Electrochim Acta (2024) 490 [ DOI: doi:10.1016/j.electacta.2024.144271 ]
- Fructose dehydrogenase small subunit (20 kDa, Protein from Gluconobacter japonicus)
- Fructose dehydrogenase cytochrome subunit (52 kDa, Protein from Gluconobacter japonicus)
- D-fructose dehydrogenase (n1146a) from gluconobacter japonicus (140 kDa, Complex from Gluconobacter japonicus)
- Heme c (618 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Fructose dehydrogenase (n1146a) large subunit (59 kDa, Protein from Gluconobacter japonicus)
- Flavin-adenine dinucleotide (785 Da, Ligand)
Fukawa E, Suzuki Y, Adachi T, Miyata T, Makino F, Tanaka H, Namba K, Sowa K, Kitazumi Y, Shirai O
Electrochim Acta (2024) 490 [ DOI: doi:10.1016/j.electacta.2024.144271 ]
- Fructose dehydrogenase small subunit (20 kDa, Protein from Gluconobacter japonicus)
- Fructose dehydrogenase cytochrome subunit (52 kDa, Protein from Gluconobacter japonicus)
- D-fructose dehydrogenase (n1146q) from gluconobacter japonicus (140 kDa, Complex from Gluconobacter japonicus)
- Heme c (618 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Fructose dehydrogenase large subunit (59 kDa, Protein from Gluconobacter japonicus)
- Flavin-adenine dinucleotide (785 Da, Ligand)
Fukawa E, Suzuki Y, Adachi T, Miyata T, Makino F, Tanaka H, Namba K, Sowa K, Kitazumi Y, Shirai O
Electrochim Acta (2024) 490 [ DOI: doi:10.1016/j.electacta.2024.144271 ]
- Fructose dehydrogenase small subunit (20 kDa, Protein from Gluconobacter japonicus)
- Fructose dehydrogenase cytochrome subunit (52 kDa, Protein from Gluconobacter japonicus)
- Heme c (618 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Fructose dehydrogenase large subunit (59 kDa, Protein from Gluconobacter japonicus)
- D-fructose dehydrogenase (n1190a) from gluconobacter japonicus (140 kDa, Complex from Gluconobacter japonicus)
- Flavin-adenine dinucleotide (785 Da, Ligand)
Resolution: 7.64 Å
EM Method: Single-particle
Fitted PDBs: 8ihl
Q-score: 0.109
Nishimura M, Fujii T, Tanaka H, Maehara K, Morishima K, Shimizu M, Kobayashi Y, Nozawa K, Takizawa Y, Sugiyama M, Ohkawa Y, Kurumizaka H
Commun Biol (2024) 7 pp. 61-61 [ DOI: doi:10.1038/s42003-023-05694-1 Pubmed: 38191828 ]
- Dna (353-mer) (109 kDa, DNA from synthetic construct)
- Histone h3.1 (15 kDa, Protein from Homo sapiens)
- Dna (353-mer) (108 kDa, DNA from synthetic construct)
- Histone h2b type 1-j (14 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Histone h2a type 1-b/e (14 kDa, Protein from Homo sapiens)
- Overlapping tri-nucleosome (511 kDa, Complex from Homo sapiens)
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8jej
Q-score: 0.653
Suzuki Y, Makino F, Miyata T, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, Shirai O
ACS Catal (2023) 13 [ DOI: doi:10.1021/acscatal.3c03769 ]
- D-fructose dehydrogenase from gluconobacter japonicus (140 kDa, Complex from Gluconobacter japonicus)
- Fructose dehydrogenase small subunit (20 kDa, Protein from Gluconobacter japonicus)
- Fructose dehydrogenase cytochrome subunit (52 kDa, Protein from Gluconobacter japonicus)
- Heme c (618 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Fructose dehydrogenase large subunit (59 kDa, Protein from Gluconobacter japonicus)
- Flavin-adenine dinucleotide (785 Da, Ligand)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8jek
Q-score: 0.619
Suzuki Y, Makino F, Miyata T, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, Shirai O
ACS Catal (2023) 13 [ DOI: doi:10.1021/acscatal.3c03769 ]
- D-fructose dehydrogenase from gluconobacter japonicus (140 kDa, Complex from Gluconobacter japonicus)
- Fructose dehydrogenase small subunit (20 kDa, Protein from Gluconobacter japonicus)
- Fructose dehydrogenase cytochrome subunit (52 kDa, Protein from Gluconobacter japonicus)
- Heme c (618 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Fructose dehydrogenase large subunit (59 kDa, Protein from Gluconobacter japonicus)
- Flavin-adenine dinucleotide (785 Da, Ligand)
Cryo-EM Structure of Membrane-Bound Alcohol Dehydrogenase from Gluconobacter oxydans (ALDH)
Adachi T, Miyata T, Makino F, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, Shirai O
ACS Catalysis (2023) 13 pp. 7955-7965 [ DOI: 10.1021/acscatal.3c01962 ]
Image sets:
Cryo-EM Structure of Membrane-Bound Aldehyde Dehydrogenase from Gluconobacter oxydans (ADH)
Adachi T, Miyata T, Makino F, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, Shirai O
ACS Catalysis (2023) 13 pp. 7955-7965 [ DOI: 10.1021/acscatal.3c01962 ]
Image sets:
Cryo-EM Structure of Membrane-Bound Alcohol Dehydrogenase from Gluconobacter oxydans
Resolution: 2.5 Å
EM Method: Single-particle
Fitted PDBs: 8gy2
Q-score: 0.615
Adachi T, Miyata T, Makino F, Tanaka H, Namba K, Kano K, Sowa K, Kitazumi Y, Shirai O
ACS Catal (2023) 13 pp. 7955-7965 [ DOI: doi:10.1021/acscatal.3c01962 ]
- Alcohol dehydrogenase from gluconobacter oxydans (150 kDa, Complex from Gluconobacter oxydans)
- Calcium ion (40 Da, Ligand)
- Heme c (618 Da, Ligand)
- Pyrroloquinoline quinone (330 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- Alcohol dehydrogenase (quinone), cytochrome c subunit (51 kDa, Protein from Gluconobacter oxydans 621H)
- Small subunit of alcohol dehydrogenase (14 kDa, Protein from Gluconobacter oxydans)
- Alcohol dehydrogenase (quinone), dehydrogenase subunit (82 kDa, Protein from Gluconobacter oxydans 621H)