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Cryo-EM structure of E. coli cytochrome bo3 quinol oxidase assembled in peptidiscs
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8qqk
Q-score: 0.594
Gao Y, Zhang Y, Hakke S, Mohren R, Sijbers LJPM, Peters PJ, Ravelli RBG
Biochim Biophys Acta Bioenerg (2024) 1865 pp. 149045-149045 [ Pubmed: 38614453 DOI: doi:10.1016/j.bbabio.2024.149045 ]
- Cytochrome bo3 quinol oxidase (144 kDa, Complex from Escherichia coli)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Cytochrome bo(3) ubiquinol oxidase subunit 2 (34 kDa, Protein from Escherichia coli BL21(DE3))
- Cytochrome bo(3) ubiquinol oxidase subunit 4 (12 kDa, Protein from Escherichia coli BL21(DE3))
- Copper (ii) ion (63 Da, Ligand)
- (2s)-3-(hexadecanoyloxy)-2-[(9z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate (760 Da, Ligand)
- 1,2-distearoyl-sn-glycerophosphoethanolamine (748 Da, Ligand)
- Cytochrome bo(3) ubiquinol oxidase subunit 1 (74 kDa, Protein from Escherichia coli BL21(DE3))
- Heme o (838 Da, Ligand)
- Cytochrome bo(3) ubiquinol oxidase subunit 3 (22 kDa, Protein from Escherichia coli BL21(DE3))
Zhang Y, van Schayck JP, Pedrazo-Tardajos A, Claes N, Noteborn WEM, Lu PH, Duimel H, Dunin-Borkowski RE, Bals S, Peters PJ, Ravelli RBG
ACS Nano (2023) 17 pp. 15836-15846 [ DOI: doi:10.1021/acsnano.3c03722 Pubmed: 37531407 ]
Zhang Y, van Schayck JP, Pedrazo-Tardajos A, Claes N, Noteborn WEM, Lu PH, Duimel H, Dunin-Borkowski RE, Bals S, Peters PJ, Ravelli RBG
ACS Nano (2023) 17 pp. 15836-15846 [ DOI: doi:10.1021/acsnano.3c03722 Pubmed: 37531407 ]
Zhang Y, van Schayck JP, Pedrazo-Tardajos A, Claes N, Noteborn WEM, Lu PH, Duimel H, Dunin-Borkowski RE, Bals S, Peters PJ, Ravelli RBG
ACS Nano (2023) 17 pp. 15836-15846 [ DOI: doi:10.1021/acsnano.3c03722 Pubmed: 37531407 ]
Zhang Y, van Schayck JP, Pedrazo-Tardajos A, Claes N, Noteborn WEM, Lu PH, Duimel H, Dunin-Borkowski RE, Bals S, Peters PJ, Ravelli RBG
ACS Nano (2023) 17 pp. 15836-15846 [ DOI: doi:10.1021/acsnano.3c03722 Pubmed: 37531407 ]
Integration of an event-driven Timepix3 hydrid pixel detector into a cryo-EM workflow
3 A CRYO-EM STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS FERRITIN FROM TIMEPIX3 detector
Resolution: 3.05 Å
EM Method: Single-particle
Fitted PDBs: 8aey
Q-score: 0.529
van Schayck JP, Zhang Y, Knoops K, Peters PJ, Ravelli RBG
Microsc Microanal (2023) [ DOI: doi:10.1093/micmic/ozac009 ]
- Water (18 Da, Ligand)
- Mycobacterium tuberculosis ferritin (Complex from Mycobacterium tuberculosis H37Rv)
- Ferritin bfrb (20 kDa, Protein from Mycobacterium tuberculosis H37Rv)
Micrographs of IAPP (amylin) amyloid fibrils
Röder C, Kupreichyk T, Gremer L, Schäfer LU, Pothula KR, Ravelli RBG, Willbold D, Hoyer W, Schröder GF
Nat. Struct. Mol. Biol. (2020) 27 pp. 660-667 [ DOI: 10.1038/s41594-020-0442-4 Pubmed: 32541895 ]
Image sets:
Micrographs of PI3-kinase SH3 amyloid fibrils
Röder C, Vettore N, Mangels LN, Gremer L, Ravelli RBG, Willbold D, Hoyer W, Buell AK, Schröder GF
Nat Commun (2019) 10 [ DOI: 10.1038/s41467-019-11320-8 Pubmed: 31434882 ]
Image sets:
Cryo-EM structure of encapsulin from Mycobacterium tuberculosis
Resolution: 2.29 Å
EM Method: Single-particle
Fitted PDBs: 7p1t
Q-score: 0.669