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RC-LH1(16) complex from Rhodopseudomonas palustris
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 6z5r
Q-score: 0.603
Swainsbury DJK, Qian P, Jackson PJ, Faries KM, Niedzwiedzki DM, Martin EC, Farmer DA, Malone LA, Thompson RF, Ranson NA, Canniffe DP, Dickman MJ, Holten D, Kirmaier C, Hitchcock A, Hunter CN
Sci Adv (2021) 7 [ Pubmed: 33523887 DOI: doi:10.1126/sciadv.abe2631 ]
- Light-harvesting complex 1 alpha chain (5 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Reaction center-light harvesting complex 1 (3 MDa, Complex from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Bacteriopheophytin a (889 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- (6~{r},10~{s},14~{r},19~{r},23~{s},24~{e},27~{s},28~{e})-2,6,10,14,19,23,27,31-octamethyldotriaconta-24,28-dien-2-ol (575 Da, Ligand)
- (4s,7r)-4-hydroxy-n,n,n-trimethyl-9-oxo-7-[(palmitoyloxy)methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (763 Da, Ligand)
- Bacteriochlorophyll a (911 Da, Ligand)
- Ubiquinone-10 (863 Da, Ligand)
- (1s)-2-{[{[(2r)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (751 Da, Ligand)
- Reaction center protein m chain (34 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- H subunit of photosynthetic reaction center complex (27 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Light-harvesting complex 1 beta chain (5 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Spirilloxanthin (596 Da, Ligand)
- Water (18 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Reaction center protein l chain (30 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
RC-LH1(14)-W complex from Rhodopseudomonas palustris
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 6z5s
Q-score: 0.593
Swainsbury DJK, Qian P, Jackson PJ, Faries KM, Niedzwiedzki DM, Martin EC, Farmer DA, Malone LA, Thompson RF, Ranson NA, Canniffe DP, Dickman MJ, Holten D, Kirmaier C, Hitchcock A, Hunter CN
Sci Adv (2021) 7 [ Pubmed: 33523887 DOI: doi:10.1126/sciadv.abe2631 ]
- Light harvesting complex 1 protein w (10 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Bacteriopheophytin a (889 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- (6~{r},10~{s},14~{r},19~{r},23~{s},24~{e},27~{s},28~{e})-2,6,10,14,19,23,27,31-octamethyldotriaconta-24,28-dien-2-ol (575 Da, Ligand)
- (4s,7r)-4-hydroxy-n,n,n-trimethyl-9-oxo-7-[(palmitoyloxy)methyl]-3,5,8-trioxa-4-phosphahexacosan-1-aminium 4-oxide (763 Da, Ligand)
- Bacteriochlorophyll a (911 Da, Ligand)
- Reaction center-light harvesting complex 1-protein w (3 MDa, Complex from Rhodopseudomonas palustris CGA009)
- Light-harvesting complex 1 alpha chain (7 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Ubiquinone-10 (863 Da, Ligand)
- (1s)-2-{[{[(2r)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (751 Da, Ligand)
- Reaction center protein m chain (34 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- H subunit of photosynthetic reaction center complex (27 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Spirilloxanthin (596 Da, Ligand)
- Water (18 Da, Ligand)
- Cardiolipin (1 kDa, Ligand)
- Reaction center protein l chain (30 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Light-harvesting complex 1 beta chain (7 kDa, Protein from Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009))