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Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 7p5h
Q-score: 0.663
Furlan C, Chongdar N, Gupta P, Lubitz W, Ogata H, Blaza JN, Birrell JA
eLife (2022) 11 [ Pubmed: 36018003 DOI: doi:10.7554/eLife.79361 ]
- Flavin mononucleotide (456 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Fe-hydrogenase, subunit gamma (20 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Tetrameric complex of hydabc protomers (640 kDa, Complex from Thermotoga maritima MSB8)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Water (18 Da, Ligand)
- Fe-hydrogenase, subunit alpha (72 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Fe-hydrogenase, subunit beta (68 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
TmHydABC- T. maritima hydrogenase with bridge closed
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7p8n
Q-score: 0.607
Furlan C, Chongdar N, Gupta P, Lubitz W, Ogata H, Blaza JN, Birrell JA
eLife (2022) 11 [ Pubmed: 36018003 DOI: doi:10.7554/eLife.79361 ]
- Flavin mononucleotide (456 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Fe-hydrogenase, subunit gamma (20 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Water (18 Da, Ligand)
- Fe-hydrogenase, subunit alpha (72 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Dimer of tmhydabc protomers forming a "closed bridge" between hyda and hydb (640 kDa, Complex from Thermotoga maritima MSB8)
- Fe-hydrogenase, subunit beta (68 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
TmHydABC- T. maritima bifurcating hydrogenase with bridge domain closed
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7p91
Q-score: 0.604
Furlan C, Chongdar N, Gupta P, Lubitz W, Ogata H, Blaza JN, Birrell JA
eLife (2022) 11 [ Pubmed: 36018003 DOI: doi:10.7554/eLife.79361 ]
- Flavin mononucleotide (456 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Fe-hydrogenase, subunit gamma (20 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Water (18 Da, Ligand)
- Fe-hydrogenase, subunit alpha (72 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Fe-hydrogenase, subunit beta (68 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Dimer of tmhydabc protomers in a bridge closed conformation (640 kDa, Complex from Thermotoga maritima MSB8)
TmHydABC- T. maritima bifurcating hydrogenase with bridge domain up
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7p92
Q-score: 0.607
Furlan C, Chongdar N, Gupta P, Lubitz W, Ogata H, Blaza JN, Birrell JA
eLife (2022) 11 [ Pubmed: 36018003 DOI: doi:10.7554/eLife.79361 ]
- Flavin mononucleotide (456 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Fe-hydrogenase, subunit gamma (20 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Open bridge conformation tmhydabc bifurcating hydrogenase (640 kDa, Complex from Thermotoga maritima MSB8)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Water (18 Da, Ligand)
- Fe-hydrogenase, subunit alpha (72 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))
- Fe-hydrogenase, subunit beta (68 kDa, Protein from Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8))