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Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7xog
Q-score: 0.294
Tan S, Zhao J, Hu X, Li Y, Wu Z, Lu G, Yu Z, Du B, Liu Y, Li L, Chen Y, Li Y, Yao Y, Zhang X, Rao J, Gao G, Peng Y, Liu H, Yuan Z, Liu J, Wang Q, Hu H, Gao X, Zhou H, Yu H, Xu Y, Yu W, Feng L, Wang M, Shan C, Lu J, Lin J
Sci Bull (Beijing) (2023) 68 pp. 3192-3206 [ Pubmed: 37993332 DOI: doi:10.1016/j.scib.2023.11.024 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Alpha-d-mannopyranose (180 Da, Ligand)
- Spike glycoprotein,peptide (142 kDa, Protein from synthetic construct)
- Severe acute respiratory syndrome coronavirus (Complex from Severe acute respiratory syndrome coronavirus)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7xoe
Q-score: 0.301
Tan S, Zhao J, Hu X, Li Y, Wu Z, Lu G, Yu Z, Du B, Liu Y, Li L, Chen Y, Li Y, Yao Y, Zhang X, Rao J, Gao G, Peng Y, Liu H, Yuan Z, Liu J, Wang Q, Hu H, Gao X, Zhou H, Yu H, Xu Y, Yu W, Feng L, Wang M, Shan C, Lu J, Lin J
Sci Bull (Beijing) (2023) 68 pp. 3192-3206 [ Pubmed: 37993332 DOI: doi:10.1016/j.scib.2023.11.024 ]
Cryo-EM structure of Oryza sativa plastid glycyl-tRNA synthetase (apo form)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7xjy
Q-score: 0.399
Yu Z, Wu Z, Li Y, Hao Q, Cao X, Blaha GM, Lin J, Lu G
Nucleic Acids Res (2023) 51 pp. 4000-4011 [ Pubmed: 36912079 DOI: doi:10.1093/nar/gkad144 ]
- Glycine--trna ligase (117 kDa, Protein from Oryza sativa Japonica Group)
- Complex (Complex from Oryza sativa subsp. japonica)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7xjz
Q-score: 0.428
Yu Z, Wu Z, Li Y, Hao Q, Cao X, Blaha GM, Lin J, Lu G
Nucleic Acids Res (2023) 51 pp. 4000-4011 [ Pubmed: 36912079 DOI: doi:10.1093/nar/gkad144 ]
- Trna(gly) (23 kDa, RNA from Oryza sativa)
- Complex (Complex)
- Glycyl-trna synthetase (Complex from Oryza sativa subsp. japonica)
- Trna (Complex from Oryza sativa)
- Glycine--trna ligase (117 kDa, Protein from Oryza sativa Japonica Group)
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 7xk0
Q-score: 0.5
Yu Z, Wu Z, Li Y, Hao Q, Cao X, Blaha GM, Lin J, Lu G
Nucleic Acids Res (2023) 51 pp. 4000-4011 [ Pubmed: 36912079 DOI: doi:10.1093/nar/gkad144 ]
- Trna(gly) (23 kDa, RNA from Oryza sativa)
- Complex (Complex)
- Glycyl-trna synthetase (Complex from Oryza sativa subsp. japonica)
- Trna (Complex from Oryza sativa)
- Glycine--trna ligase (117 kDa, Protein from Oryza sativa Japonica Group)
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 7xk1
Q-score: 0.279
Yu Z, Wu Z, Li Y, Hao Q, Cao X, Blaha GM, Lin J, Lu G
Nucleic Acids Res (2023) 51 pp. 4000-4011 [ Pubmed: 36912079 DOI: doi:10.1093/nar/gkad144 ]
- Trna(gly) (23 kDa, RNA from Oryza sativa)
- Complex (Complex)
- Glycyl-trna synthetase (Complex from Oryza sativa subsp. japonica)
- Trna (Complex from Oryza sativa)
- Glycine--trna ligase (117 kDa, Protein from Oryza sativa Japonica Group)
Resolution: 4.5 Å
EM Method: Single-particle
Fitted PDBs: 8h1c
Q-score: 0.236
Yu Z, Wu Z, Li Y, Hao Q, Cao X, Blaha GM, Lin J, Lu G
Nucleic Acids Res (2023) 51 pp. 4000-4011 [ Pubmed: 36912079 DOI: doi:10.1093/nar/gkad144 ]
- Trna(gly) (74-mer) (23 kDa, RNA from Oryza sativa)
- Glycine--trna ligase (117 kDa, Protein from Oryza sativa Japonica Group)
- Complex (Complex from Oryza sativa Japonica Group)
Cryo-EM structure of BAP1-ASXL1 bound to chromatosome
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8h1t
Q-score: 0.435
Ge W, Yu C, Li J, Yu Z, Li X, Zhang Y, Liu CP, Li Y, Tian C, Zhang X, Li G, Zhu B, Xu RM
Nature (2023) 616 pp. 176-182 [ DOI: doi:10.1038/s41586-023-05841-y Pubmed: 36991118 ]
- Ubiquitin (8 kDa, Protein from Homo sapiens)
- Dna (187-mer) (58 kDa, DNA from Homo sapiens)
- Histone h2b type 2-e (13 kDa, Protein from Homo sapiens)
- Ubiquitin carboxyl-terminal hydrolase bap1 (80 kDa, Protein from Homo sapiens)
- Polycomb group protein asxl1 (41 kDa, Protein from Homo sapiens)
- Dna (187-mer) (57 kDa, DNA from Homo sapiens)
- Cryo-em structure of bap1-asxl1 bound to chromatosome (Complex from Homo sapiens)
- Histone h2a type 1-d (14 kDa, Protein from Homo sapiens)
- Histone h3.1 (15 kDa, Protein from Homo sapiens)
- Histone h1.4 (23 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)