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EBOV GP bound to rEBOV-442 and rEBOV-515 Fabs
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7m8l
Q-score: 0.433
Gilchuk P, Murin CD, Cross RW, Ilinykh PA, Huang K, Kuzmina N, Borisevich V, Agans KN, Geisbert JB, Zost SJ, Nargi RS, Sutton RE, Suryadevara N, Bombardi RG, Carnahan RH, Bukreyev A, Geisbert TW, Ward AB, Crowe Jr JE
Cell (2021) 184 pp. 5593-5607.e18 [ Pubmed: 34715022 DOI: doi:10.1016/j.cell.2021.09.035 ]
- Virion spike glycoprotein 2 (22 kDa, Protein from Ebola virus)
- Virion spike glycoprotein 1 (34 kDa, Protein from Ebola virus)
- Rebov-442 fab heavy chain (25 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Rebov-515 fab light chain (23 kDa, Protein from Homo sapiens)
- Complex of mucin deleted ebola virus gp (makona variant) bound to rebov-442 and rebov-515 fabs (Complex from Ebola virus)
- Rebov-442 fab light chain (23 kDa, Protein from Homo sapiens)
- Rebov-515 fab heavy chain (24 kDa, Protein from Homo sapiens)
BDBV-289 bound to EBOV GPdMuc Makona
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7kej
Q-score: 0.451
Murin CD, Gilchuk P, Ilinykh PA, Huang K, Kuzmina N, Shen X, Bruhn JF, Bryan AL, Davidson E, Doranz BJ, Williamson LE, Copps J, Alkutkar T, Flyak AI, Bukreyev A, Crowe Jr JE, Ward AB
Cell Rep (2021) 35 pp. 108984-108984 [ DOI: doi:10.1016/j.celrep.2021.108984 Pubmed: 33852862 ]
- Virion spike glycoprotein (34 kDa, Protein from Ebola virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Virion spike glycoprotein (22 kDa, Protein from Zaire ebolavirus)
- Antibody fab heavy chain (hc) bdbv-289 (26 kDa, Protein from Homo sapiens)
- Complex of ebola virus gp (mucin-deleted makona strain) bound to bdbv-289 fab (Complex from Homo sapiens)
- Antibody fab light chain (lc) bdbv-289 (24 kDa, Protein from Homo sapiens)
Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-293
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 7kex
Q-score: 0.256
Murin CD, Gilchuk P, Ilinykh PA, Huang K, Kuzmina N, Shen X, Bruhn JF, Bryan AL, Davidson E, Doranz BJ, Williamson LE, Copps J, Alkutkar T, Flyak AI, Bukreyev A, Crowe Jr JE, Ward AB
Cell Rep (2021) 35 pp. 108984-108984 [ DOI: doi:10.1016/j.celrep.2021.108984 Pubmed: 33852862 ]
- Ebov-293 fab (Complex from Homo sapiens)
- Virion spike glycoprotein 2 (22 kDa, Protein from Ebola virus)
- Virion spike glycoprotein 1 (34 kDa, Protein from Ebola virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Complex of ebola virus gp (mucin deleted, makona strain) bound to the antibody fab ebov-293 and ebov-515 (Complex from Homo sapiens)
- Antibody fab ebov-293 heavy chain (26 kDa, Protein from Homo sapiens)
- Ebola virus gp (mucin deleted, makona strain) (Complex from Ebola virus)
- Antibody fab ebov-293 light chain (25 kDa, Protein from Homo sapiens)
Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-296 and EBOV-515
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 7kf9
Q-score: 0.251
Murin CD, Gilchuk P, Ilinykh PA, Huang K, Kuzmina N, Shen X, Bruhn JF, Bryan AL, Davidson E, Doranz BJ, Williamson LE, Copps J, Alkutkar T, Flyak AI, Bukreyev A, Crowe Jr JE, Ward AB
Cell Rep (2021) 35 pp. 108984-108984 [ DOI: doi:10.1016/j.celrep.2021.108984 Pubmed: 33852862 ]
- Virion spike glycoprotein 2 (22 kDa, Protein from Ebola virus)
- Virion spike glycoprotein 1 (34 kDa, Protein from Ebola virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Ebola virus gp (mucin deleted, makona strain) (Complex from Ebola virus)
- Antibody fab ebov-296 heavy chain (27 kDa, Protein from Homo sapiens)
- Ebov-296 fab (Complex from Homo sapiens)
- Antibody fab ebov-296 light chain (24 kDa, Protein from Homo sapiens)
- Ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-296 and ebov-515 (Complex from Ebola virus)
Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-442 and EBOV-515
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7kfb
Q-score: 0.409
Murin CD, Gilchuk P, Ilinykh PA, Huang K, Kuzmina N, Shen X, Bruhn JF, Bryan AL, Davidson E, Doranz BJ, Williamson LE, Copps J, Alkutkar T, Flyak AI, Bukreyev A, Crowe Jr JE, Ward AB
Cell Rep (2021) 35 pp. 108984-108984 [ DOI: doi:10.1016/j.celrep.2021.108984 Pubmed: 33852862 ]
- Antibody fab ebov-442 light chain (23 kDa, Protein from Homo sapiens)
- Virion spike glycoprotein 2 (22 kDa, Protein from Ebola virus)
- Virion spike glycoprotein 1 (34 kDa, Protein from Ebola virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Antibody fab ebov-442 (Complex from Homo sapiens)
- Ebola virus gp (mucin deleted, makona strain) (Complex from Ebola virus)
- Ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-442 and ebov-515 (Complex from Ebola virus)
- Antibody fab ebov-442 heavy chain (25 kDa, Protein from Homo sapiens)
Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-237 and EBOV-515
Murin CD, Gilchuk P, Ilinykh PA, Huang K, Kuzmina N, Shen X, Bruhn JF, Bryan AL, Davidson E, Doranz BJ, Williamson LE, Copps J, Alkutkar T, Flyak AI, Bukreyev A, Crowe Jr JE, Ward AB
Cell Rep (2021) 35 pp. 108984-108984 [ DOI: doi:10.1016/j.celrep.2021.108984 Pubmed: 33852862 ]
- Antibody fab ebov-237 heavy chain (Protein from Homo sapiens)
- Antibody fab ebov-237 light chain (Protein from Homo sapiens)
- Ebola virus gp1 (mucin deleted, makona strain) (Protein from Ebola virus)
- Ebola virus gp2 (makona strain) (Protein from Ebola virus)
- Ebola virus gp (mucin deleted, makona strain) (Complex from Ebola virus)
- Antibody fab ebov-237 (Complex from Homo sapiens)
- Ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-237 and ebov-515 (Complex from Ebola virus)
Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-437 and EBOV-515
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7kfh
Q-score: 0.413
Murin CD, Gilchuk P, Ilinykh PA, Huang K, Kuzmina N, Shen X, Bruhn JF, Bryan AL, Davidson E, Doranz BJ, Williamson LE, Copps J, Alkutkar T, Flyak AI, Bukreyev A, Crowe Jr JE, Ward AB
Cell Rep (2021) 35 pp. 108984-108984 [ DOI: doi:10.1016/j.celrep.2021.108984 Pubmed: 33852862 ]
- Ebola virus gp (mucin deleted, makona strain) bound to antibody fab ebov-437 and ebov-515 (Complex from Homo sapiens)
- Virion spike glycoprotein 2 (22 kDa, Protein from Ebola virus)
- Virion spike glycoprotein 1 (34 kDa, Protein from Ebola virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Antibody fab ebov-437 light chain (23 kDa, Protein from Homo sapiens)
- Antibody fab ebov-437 heavy chain (25 kDa, Protein from Homo sapiens)
EBOV GPdTM (Mayinga) in complex with rEBOV-548 Fab
Gilchuk P, Murin CD, Milligan JC, Cross RW, Mire CE, Ilinykh PA, Huang K, Kuzmina N, Altman PX, Hui S, Gunn BM, Bryan AL, Davidson E, Doranz BJ, Turner HL, Alkutkar T, Flinko R, Orlandi C, Carnahan R, Nargi R, Bombardi RG, Vodzak ME, Li S, Okoli A, Ibeawuchi M, Ohiaeri B, Lewis GK, Alter G, Bukreyev A, Saphire EO, Geisbert TW, Ward AB, Crowe Jr JE
Immunity (2020) 52 pp. 388-403.e12 [ Pubmed: 32023489 DOI: doi:10.1016/j.immuni.2020.01.001 ]
EBOV GPdMuc (Makona) in complex with rEBOV-520 and rEBOV-548 Fabs
Resolution: 4.12 Å
EM Method: Single-particle
Fitted PDBs: 6pci
Q-score: 0.38
Gilchuk P, Murin CD, Milligan JC, Cross RW, Mire CE, Ilinykh PA, Huang K, Kuzmina N, Altman PX, Hui S, Gunn BM, Bryan AL, Davidson E, Doranz BJ, Turner HL, Alkutkar T, Flinko R, Orlandi C, Carnahan R, Nargi R, Bombardi RG, Vodzak ME, Li S, Okoli A, Ibeawuchi M, Ohiaeri B, Lewis GK, Alter G, Bukreyev A, Saphire EO, Geisbert TW, Ward AB, Crowe Jr JE
Immunity (2020) 52 pp. 388-403.e12 [ Pubmed: 32023489 DOI: doi:10.1016/j.immuni.2020.01.001 ]
- Virion spike glycoprotein (31 kDa, Protein from Ebola virus)
- Rebov-548 fab (Complex)
- Rebov-548 fab light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Ebola virus (makona) gp (Complex)
- Ebov gpdmuc (makona) in complex with rebov-520 and rebov-548 fabs (450 kDa, Complex from Homo sapiens)
- Rebov-520 fab light chain (23 kDa, Protein from Homo sapiens)
- Rebov-548 fab heavy chain (25 kDa, Protein from Homo sapiens)
- Rebov-520 fab heavy chain (24 kDa, Protein from Homo sapiens)
- Rebov-520 fab (Complex)
- Virion spike glycoprotein,virion spike glycoprotein,ebola virus (makona) gp2 (22 kDa, Protein from Ebola virus)
EBOV GPdMuc Makona bound to rEBOV-548 Fab
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 6uye
Q-score: 0.413
Gilchuk P, Murin CD, Milligan JC, Cross RW, Mire CE, Ilinykh PA, Huang K, Kuzmina N, Altman PX, Hui S, Gunn BM, Bryan AL, Davidson E, Doranz BJ, Turner HL, Alkutkar T, Flinko R, Orlandi C, Carnahan R, Nargi R, Bombardi RG, Vodzak ME, Li S, Okoli A, Ibeawuchi M, Ohiaeri B, Lewis GK, Alter G, Bukreyev A, Saphire EO, Geisbert TW, Ward AB, Crowe Jr JE
Immunity (2020) 52 pp. 388-403.e12 [ Pubmed: 32023489 DOI: doi:10.1016/j.immuni.2020.01.001 ]
- Virion spike glycoprotein (10 kDa, Protein from Ebola virus)
- Ebola virus, mucin deleted, strain makona (Complex from Ebola virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sgp (29 kDa, Protein from Ebola virus)
- Rebov-548 fab (Complex from Homo sapiens)
- Antibody rebov-548 fab, light chain (11 kDa, Protein from Homo sapiens)
- Complex of ebola virus, mucin deleted, strain makona in complex with rebov-548 fab (Complex)
- Antibody rebov-548 fab, heavy chain (14 kDa, Protein from Homo sapiens)