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Structure of type I-D Cascade bound to a dsDNA target
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7sba
Q-score: 0.453
Schwartz EA, McBride TM, Bravo JPK, Wrapp D, Fineran PC, Fagerlund RD, Taylor DW
Nat Commun (2022) 13 pp. 2829-2829 [ Pubmed: 35595728 DOI: doi:10.1038/s41467-022-30402-8 ]
- Type i-d cascade bound to a dsdna target (480 kDa, Complex)
- Cas10d (112 kDa, Protein from Synechocystis sp. PCC 6803)
- Cas7d (36 kDa, Protein from Synechocystis sp. PCC 6803)
- Crrna (13 kDa, RNA from Synechocystis sp. PCC 6803)
- Dna target strand (4 kDa, DNA from synthetic construct)
- Dna non-target strand (3 kDa, DNA from synthetic construct)
- Cas11d (17 kDa, Protein from Synechocystis sp. PCC 6803)
- Cas5d (28 kDa, Protein from Synechocystis sp. PCC 6803)
Structure of type I-D Cascade bound to a ssRNA target
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7sbb
Q-score: 0.433
Schwartz EA, McBride TM, Bravo JPK, Wrapp D, Fineran PC, Fagerlund RD, Taylor DW
Nat Commun (2022) 13 pp. 2829-2829 [ Pubmed: 35595728 DOI: doi:10.1038/s41467-022-30402-8 ]
- Type i-d cascade bound to a ssrna target (450 kDa, Complex)
- Cas10d (112 kDa, Protein from Synechocystis sp. PCC 6803)
- Cas7d (36 kDa, Protein from Synechocystis sp. PCC 6803)
- Crrna (13 kDa, RNA from Synechocystis sp. PCC 6803)
- Ssrna target (10 kDa, RNA from synthetic construct)
- Cas11d (17 kDa, Protein from Synechocystis sp. PCC 6803)
- Cas5d (28 kDa, Protein from Synechocystis sp. PCC 6803)
Cryo-EM Structure of the Desulfovibrio vulgaris Type I-C Apo Cascade
Resolution: 3.13 Å
EM Method: Single-particle
Fitted PDBs: 7kha
Q-score: 0.486
O'Brien RE, Santos IC, Wrapp D, Bravo JPK, Schwartz EA, Brodbelt JS, Taylor DW
Nat Commun (2020) 11 pp. 5931-5931 [ DOI: doi:10.1038/s41467-020-19785-8 Pubmed: 33230133 ]
- Crispr-associated protein, tm1801 family (32 kDa, Protein from Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303))
- Crispr-associated protein, ct1134 family (25 kDa, Protein from Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303))
- Crispr-associated protein, ct1133 family (59 kDa, Protein from Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303))
- Rna (45-mer) (14 kDa, RNA from Desulfovibrio vulgaris str. Hildenborough)
- Crispr-associated protein, ct1133 family (14 kDa, Protein from Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303))
- Type i-c apo cascade (371 kDa, Complex from Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / DSM 644 / NCIMB 8303))