Electron Microscopy Data Bank

EMD-31709

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Baseplate of Photorhabdus Virulence Cassette (PVC) loaded with PldA

Release date: Aug. 17, 2022
Resolution: 5.4 Å
EM Method: Single-particle

Jiang F, Shen J, Cheng J, Wang X, Yang J, Li N, Gao N, Jin Q

Sci Adv (2022) 8 pp. eabm2343-eabm2343 [ DOI: doi:10.1126/sciadv.abm2343 Pubmed: 35486720 ]

Sample:

Baseplate of photorhabdus virulence cassette (pvc) loaded with plda (Complex from Photorhabdus asymbiotica)

EMD-31710

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Sheath-tube trunk of Photorhabdus Virulence Cassette (PVC) loaded with PldA

Release date: Aug. 17, 2022
Resolution: 10.8 Å
EM Method: Single-particle

Jiang F, Shen J, Cheng J, Wang X, Yang J, Li N, Gao N, Jin Q

Sci Adv (2022) 8 pp. eabm2343-eabm2343 [ DOI: doi:10.1126/sciadv.abm2343 Pubmed: 35486720 ]

Sample:

Sheath-tube trunk of photorhabdus virulence cassette (pvc) loaded with plda (Complex from Photorhabdus asymbiotica)

EMD-31354

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PVC-Pnf baseplate

Release date: June 30, 2021
Resolution: 3.7 Å
EM Method: Single-particle

Wang X, Cheng J, Shen J, Liu L, Li N, Gao N, Jiang F, Jin Q

Sci China Life Sci (2022) 65 pp. 618-630 [ DOI: doi:10.1007/s11427-021-1955-4 Pubmed: 34185241 ]

Sample:

Pvc with effectors pnf and pdp1 (Complex from Photorhabdus asymbiotica)

EMD-31355

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PVC-Pnf trunk

Release date: June 30, 2021
Resolution: 3.6 Å
EM Method: Single-particle

Wang X, Cheng J, Shen J, Liu L, Li N, Gao N, Jiang F, Jin Q

Sci China Life Sci (2022) 65 pp. 618-630 [ DOI: doi:10.1007/s11427-021-1955-4 Pubmed: 34185241 ]

Sample:

Pvc-pnf trunk (Complex from Photorhabdus asymbiotica)

EMD-31356

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PVC-Pdp1 baseplate

Release date: June 30, 2021
Resolution: 3.8 Å
EM Method: Single-particle

Wang X, Cheng J, Shen J, Liu L, Li N, Gao N, Jiang F, Jin Q

Sci China Life Sci (2022) 65 pp. 618-630 [ DOI: doi:10.1007/s11427-021-1955-4 Pubmed: 34185241 ]

Sample:

Pvc-pdp1 baseplate (Complex from Photorhabdus asymbiotica)

EMD-31357

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PVC-Pdp1 trunk

Release date: June 30, 2021
Resolution: 3.6 Å
EM Method: Single-particle

Wang X, Cheng J, Shen J, Liu L, Li N, Gao N, Jiang F, Jin Q

Sci China Life Sci (2022) 65 pp. 618-630 [ DOI: doi:10.1007/s11427-021-1955-4 Pubmed: 34185241 ]

Sample:

Pvc-pdp1 trunk (Complex from Photorhabdus asymbiotica)

EMD-31358

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PVC-Empty baseplate

Release date: June 30, 2021
Resolution: 3.9 Å
EM Method: Single-particle

Wang X, Cheng J, Shen J, Liu L, Li N, Gao N, Jiang F, Jin Q

Sci China Life Sci (2022) 65 pp. 618-630 [ DOI: doi:10.1007/s11427-021-1955-4 Pubmed: 34185241 ]

Sample:

Pvc-empty baseplate (Complex from Photorhabdus asymbiotica)

EMD-31359

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PVC-Empty trunk

Release date: June 30, 2021
Resolution: 3.8 Å
EM Method: Single-particle

Wang X, Cheng J, Shen J, Liu L, Li N, Gao N, Jiang F, Jin Q

Sci China Life Sci (2022) 65 pp. 618-630 [ DOI: doi:10.1007/s11427-021-1955-4 Pubmed: 34185241 ]

Sample:

Pvc-empty trunk (Complex from Photorhabdus asymbiotica)

EMD-9762

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Cryo-EM Structure of an Extracellular Contractile Injection System, full length PVC particle in extended state

Release date: April 24, 2019
Resolution: 6.2 Å
EM Method: Single-particle

Jiang F, Li N, Wang X, Cheng J, Huang Y, Yang Y, Yang J, Cai B, Wang YP, Jin Q, Gao N

Cell (2019) 177 pp. 370-383.e15 [ DOI: doi:10.1016/j.cell.2019.02.020 Pubmed: 30905475 ]

Sample:

Full length pvc particles in extended state (Complex from Photorhabdus asymbiotica)

EMD-9760

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Cryo-EM Structure of an Extracellular Contractile Injection System, PVC sheath-tube complex in extended state

Release date: April 10, 2019
Resolution: 2.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 6j0b
Q-score: 0.552

Jiang F, Li N, Wang X, Cheng J, Huang Y, Yang Y, Yang J, Cai B, Wang YP, Jin Q, Gao N

Cell (2019) 177 pp. 370-383.e15 [ DOI: doi:10.1016/j.cell.2019.02.020 Pubmed: 30905475 ]

Sample:

Sheath and tube in extended state (Complex from Photorhabdus asymbiotica)
Pvc1 (16 kDa, Protein from Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Pvc2 (39 kDa, Protein from Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))

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