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Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8qma
Q-score: 0.461
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910- [ DOI: doi:10.1016/j.molcel.2024.02.003 Pubmed: 38428434 ]
- Pap9 (34 kDa, Protein from Sinapis alba)
- Pap3 (79 kDa, Protein from Sinapis alba)
- Pap7 (55 kDa, Protein from Sinapis alba)
- Pap12 (dna-directed rna polymerase subunit omega) (18 kDa, Protein from Sinapis alba)
- Fe (iii) ion (55 Da, Ligand)
- Dna-directed rna polymerase subunit beta'' (156 kDa, Protein from Sinapis alba)
- Pap4 (30 kDa, Protein from Sinapis alba)
- Dna-directed rna polymerase subunit beta' (78 kDa, Protein from Sinapis alba)
- S-adenosylmethionine (398 Da, Ligand)
- Plastid-encoded dna-dependent rna polymerase (pep) (1 MDa, Complex from Sinapis alba)
- Pap11 (85 kDa, Protein from Sinapis alba)
- Dna-directed rna polymerase subunit beta (121 kDa, Protein from Sinapis alba)
- Pap5 (60 kDa, Protein from Sinapis alba)
- Dna-directed rna polymerase subunit alpha (37 kDa, Protein from Sinapis alba)
- Pap1 (103 kDa, Protein from Sinapis alba)
- Pap6 (52 kDa, Protein from Sinapis alba)
- Pap10 (20 kDa, Protein from Sinapis alba)
- Zinc ion (65 Da, Ligand)
- Pap8 (38 kDa, Protein from Sinapis alba)
- Ptac18 (16 kDa, Protein from Sinapis alba)
- Fln2 (68 kDa, Protein from Sinapis alba)
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map A
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ DOI: doi:10.1016/j.molcel.2024.02.003 Pubmed: 38428434 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map B.
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ DOI: doi:10.1016/j.molcel.2024.02.003 Pubmed: 38428434 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map D
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ DOI: doi:10.1016/j.molcel.2024.02.003 Pubmed: 38428434 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba.- Map E
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ DOI: doi:10.1016/j.molcel.2024.02.003 Pubmed: 38428434 ]
Structure of the plastid-encoded RNA polymerase complex (PEP) from Sinapis alba - Map F
do Prado PFV, Ahrens FM, Liebers M, Ditz N, Braun HP, Pfannschmidt T, Hillen HS
Mol Cell (2024) 84 pp. 910-925.e5 [ DOI: doi:10.1016/j.molcel.2024.02.003 Pubmed: 38428434 ]
Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling - dataset2
Methods in molecular biology (Clifton, N.J.) (2023) 2661 pp. 89-100 [ Pubmed: 37166633 DOI: 10.1007/978-1-0716-3171-3_6 ]
Image sets:
Single particle cryo-EM dataset of Sars-CoV2 Rna dependent RNA polymerase
Jochheim FA, Tegunov D, Hillen HS, Schmitzová J, Kokic G, Dienemann C, Cramer P
Commun Biol (2021) 4 [ Pubmed: 34429502 DOI: 10.1038/s42003-021-02529-9 ]
Image sets:
Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase
Resolution: 5.5 Å
EM Method: Single-particle
Fitted PDBs: 7oyg
Q-score: 0.151
Jochheim FA, Tegunov D, Hillen HS, Schmitzova J, Kokic G, Dienemann C, Cramer P
Communications Biology (2021) 4 pp. 999- [ DOI: doi:10.1038/s42003-021-02529-9 ]
- Sars-cov-2 nsp7 (9 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Rna (5'-r(p*up*gp*cp*ap*cp*up*gp*cp*gp*up*ap*g)-3') (18 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 rna-dependent rna polymerase (nsp12) (107 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Dimeric form of sars-cov-2 rna-dependent rna polymerase complex (nsp12, nsp7, nsp8) (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 nsp8 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Rna (5'-r(p*cp*up*ap*cp*gp*cp*ap*gp*up*g)-3') (4 kDa, RNA from Severe acute respiratory syndrome coronavirus 2)
- Zinc ion (65 Da, Ligand)