Electron Microscopy Data Bank

EMPIAR-11306

Release date: Feb. 3, 2023
Dataset size: 622.2 GB
Experiment type: EMDB

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patáková Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 [ DOI: 10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Image sets:

Tilt-series recorded on argon PFIB lamellae of HeLa cells

EMD-15636

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Human 80S ribosome structure from pFIB-lamellae

Release date: Jan. 25, 2023
Resolution: 4.9 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

EMD-16185

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80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: 15 to 30 nm

Release date: Jan. 25, 2023
Resolution: 9.8 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

EMD-16186

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80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: above 30 nm matched control (for 15 to 30 nm)

Release date: Jan. 25, 2023
Resolution: 8.0 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

EMD-16192

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80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer:30 to 45 nm

Release date: Jan. 25, 2023
Resolution: 7.6 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

EMD-16193

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80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: above 45 nm matched control (for 30 to 45 nm)

Release date: Jan. 25, 2023
Resolution: 7.3 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

EMD-16194

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80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer:45 to 60 nm

Release date: Jan. 25, 2023
Resolution: 7.3 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

EMD-16195

Download Map 3D View

80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: above 60 nm matched control (for 45 to 60 nm)

Release date: Jan. 25, 2023
Resolution: 7.6 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

EMD-16196

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80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: 0 to 15 nm

Release date: Jan. 25, 2023
Resolution: 21.4 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

EMD-16199

Download Map 3D View

80S human ribosome structure from PFIB lamellae of HeLa cells for assessing the extend and depth of the damage layer: above 15 nm matched control (for 0 to 15 nm)

Release date: Jan. 25, 2023
Resolution: 13.2 Å
EM Method: Subtomogram averaging

Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patakova Z, Darrow MC, Naismith JH, Grange M

Nat Commun (2023) 14 pp. 629-629 [ DOI: doi:10.1038/s41467-023-36372-9 Pubmed: 36746945 ]

Sample:

80s human ribosome (Cell from Homo sapiens)

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