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3.1 Angstrom cryoEM icosahedral reconstruction of mud crab reovirus
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7xr2
Q-score: 0.548
Zhang Q, Gao Y, Baker ML, Liu S, Jia X, Xu H, He J, Kaelber JT, Weng S, Jiang W
PLoS Pathog (2023) 19 pp. e1011341-e1011341 [ Pubmed: 37083840 DOI: doi:10.1371/journal.ppat.1011341 ]
- Scylla serrata reovirus sz-2007 (Virus from Scylla serrata reovirus SZ-2007)
- Vp12 (29 kDa, Protein from Scylla serrata reovirus SZ-2007)
- Vp11 (23 kDa, Protein from Scylla serrata reovirus SZ-2007)
- Vp3 (97 kDa, Protein from Scylla serrata reovirus SZ-2007)
3.4 Angstrom cryoEM D5 reconstruction of mud crab reovirus
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7xr3
Q-score: 0.358
Zhang Q, Gao Y, Baker ML, Liu S, Jia X, Xu H, He J, Kaelber JT, Weng S, Jiang W
PLoS Pathog (2023) 19 pp. e1011341-e1011341 [ Pubmed: 37083840 DOI: doi:10.1371/journal.ppat.1011341 ]
- Scylla serrata reovirus sz-2007 (Virus from Scylla serrata reovirus SZ-2007)
- Vp3 (97 kDa, Protein from Scylla serrata reovirus SZ-2007)
- Vp1 (161 kDa, Protein from Scylla serrata reovirus SZ-2007)
Resolution: 5.9 Å
EM Method: Single-particle
Fitted PDBs: 7v0n
Q-score: 0.123
Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE
PNAS (2023) 120 pp. e2213690120-e2213690120 [ DOI: doi:10.1073/pnas.2213690120 Pubmed: 36961925 ]
- Spike glycoprotein e1 (43 kDa, Protein from Eastern equine encephalitis virus)
- Igg 21 fab light chain (18 kDa, Protein from Homo sapiens)
- Spike glycoprotein e2 (38 kDa, Protein from Eastern equine encephalitis virus)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- Igg 21 fab heavy chain (20 kDa, Protein from Homo sapiens)
Resolution: 6.6 Å
EM Method: Single-particle
Fitted PDBs: 7v0o
Q-score: 0.102
Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE
PNAS (2023) 120 pp. e2213690120-e2213690120 [ DOI: doi:10.1073/pnas.2213690120 Pubmed: 36961925 ]
- Spike glycoprotein e1 (43 kDa, Protein from Eastern equine encephalitis virus)
- Spike glycoprotein e2 (38 kDa, Protein from Eastern equine encephalitis virus)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- Igg 94 fab light chain (17 kDa, Protein from Homo sapiens)
- Igg 94 fab heavy chain (18 kDa, Protein from Homo sapiens)
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 7v0p
Q-score: 0.17
Williamson LE, Bandyopadhyay A, Bailey K, Sirohi D, Klose T, Julander JG, Kuhn RJ, Crowe Jr JE
PNAS (2023) 120 pp. e2213690120-e2213690120 [ DOI: doi:10.1073/pnas.2213690120 Pubmed: 36961925 ]
- Spike glycoprotein e1 (43 kDa, Protein from Eastern equine encephalitis virus)
- Spike glycoprotein e2 (38 kDa, Protein from Eastern equine encephalitis virus)
- Eastern equine encephalitis virus (Virus from Eastern equine encephalitis virus)
- Igg 106 fab heavy chain (19 kDa, Protein from Homo sapiens)
- Igg 106 fab light chain (18 kDa, Protein from Homo sapiens)
Structure of dengue virus (DENV2) in complex with prM12, an anti-PrM monoclonal antibody
Resolution: 10.2 Å
EM Method: Single-particle
Fitted PDBs: 8fe3
Q-score: 0.059
A Dowd K, Sirohi D, D Speer S, VanBlargan LA, Chen RE, Mukherjee S, Whitener BM, Govero J, Aleshnick M, Larman B, Sukupolvi-Petty S, Sevvana M, Miller AS, Klose T, Zheng A, Koenig S, Kielian M, Kuhn RJ, Diamond MS, Pierson TC
PNAS (2023) 120 pp. e2218899120-e2218899120 [ Pubmed: 36638211 DOI: doi:10.1073/pnas.2218899120 ]
- Prm12 fab heavy chain (24 kDa, Protein from Mus musculus)
- Prm protein (9 kDa, Protein from Dengue virus type 2)
- Envelope protein e (43 kDa, Protein from Dengue virus type 2)
- Prm12 fab light chain (23 kDa, Protein from Mus musculus)
- Dengue virus 2 (Virus from Dengue virus 2)
Structure of dengue virus (DENV2) in complex with prM13, an anti-PrM monoclonal antibody
Resolution: 9.8 Å
EM Method: Single-particle
Fitted PDBs: 8fe4
Q-score: 0.062
A Dowd K, Sirohi D, D Speer S, VanBlargan LA, Chen RE, Mukherjee S, Whitener BM, Govero J, Aleshnick M, Larman B, Sukupolvi-Petty S, Sevvana M, Miller AS, Klose T, Zheng A, Koenig S, Kielian M, Kuhn RJ, Diamond MS, Pierson TC
PNAS (2023) 120 pp. e2218899120-e2218899120 [ Pubmed: 36638211 DOI: doi:10.1073/pnas.2218899120 ]
- Prm protein (9 kDa, Protein from Dengue virus type 2)
- Envelope protein e (43 kDa, Protein from Dengue virus type 2)
- Dengue virus 2 (Virus from Dengue virus 2)
- Prm13 fab heavy chain (23 kDa, Protein from Mus musculus)
- Prm13 fab light chain (23 kDa, Protein from Mus musculus)