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SARS-CoV-2 Spike in complex with biparatopic nanobody BP10
Pymm P, Redmond SJ, Dolezal O, Mordant F, Lopez E, Cooney JP, Davidson KC, Haycroft ER, Tan CW, Seneviratna R, Grimley SL, Purcell DFJ, Kent SJ, Wheatley AK, Wang LF, Leis A, Glukhova A, Pellegrini M, Chung AW, Subbarao K, Uldrich AP, Tham WH, Godfrey DI, Gherardin NA
iScience (2022) 25 pp. 105259-105259 [ Pubmed: 36213007 DOI: doi:10.1016/j.isci.2022.105259 ]
- Bp10 biparatopic nanobody (Complex from Vicugna pacos)
- Bp10 biparatopic nanobody (Protein from Vicugna pacos)
- Sars-cov-2 spike (Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike in complex with biparatopic nanobody bp10 (1 MDa, Complex)
- Sars-cov-2 spike (Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 RBD in complex with biparatopic nanobody BP10 local refinement
Pymm P, Redmond SJ, Dolezal O, Mordant F, Lopez E, Cooney JP, Davidson KC, Haycroft ER, Tan CW, Seneviratna R, Grimley SL, Purcell DFJ, Kent SJ, Wheatley AK, Wang LF, Leis A, Glukhova A, Pellegrini M, Chung AW, Subbarao K, Uldrich AP, Tham WH, Godfrey DI, Gherardin NA
iScience (2022) 25 pp. 105259-105259 [ Pubmed: 36213007 DOI: doi:10.1016/j.isci.2022.105259 ]
- Bp10 biparatopic nanobody (Complex from Vicugna pacos)
- Sars-cov-2 rbd (Complex from Severe acute respiratory syndrome coronavirus 2)
- Bp10 biparatopic nanobody (Protein from Vicugna pacos)
- Sars-cov-2 rbd (Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike in complex with biparatopic nanobody bp10 (1 MDa, Complex)
SARS-CoV-spike bound to two neutralising nanobodies
Resolution: 2.62 Å
EM Method: Single-particle
Fitted PDBs: 7b18
Q-score: 0.397
Koenig PA, Das H, Liu H, Kummerer BM, Gohr FN, Jenster LM, Schiffelers LDJ, Tesfamariam YM, Uchima M, Wuerth JD, Gatterdam K, Ruetalo N, Christensen MH, Fandrey CI, Normann S, Todtmann JMP, Pritzl S, Hanke L, Boos J, Yuan M, Zhu X, Schmid-Burgk JL, Kato H, Schindler M, Wilson IA, Geyer M, Ludwig KU, Hallberg BM, Wu NC, Schmidt FI
Science (2021) 371 [ Pubmed: 33436526 DOI: doi:10.1126/science.abe6230 ]
- Nanobody against spike glycoprotein vhh v (Complex from Vicugna pacos)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Nanobody against spike glycoprotein vhh v (12 kDa, Protein from Vicugna pacos)
- Spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 glycoprotein in complex with two nanobodys named v (510 kDa, Complex)
- Nanobody against sars-cov-2 vhh e (14 kDa, Protein from Lama glama)
- Nanobody against sars-cov-2 vhh e (Complex from Lama glama)
SARS-CoV-spike RBD bound to two neutralising nanobodies.
Resolution: 4.01 Å
EM Method: Single-particle
Fitted PDBs: 7b17
Q-score: 0.272
Koenig PA, Das H, Liu H, Kummerer BM, Gohr FN, Jenster LM, Schiffelers LDJ, Tesfamariam YM, Uchima M, Wuerth JD, Gatterdam K, Ruetalo N, Christensen MH, Fandrey CI, Normann S, Todtmann JMP, Pritzl S, Hanke L, Boos J, Yuan M, Zhu X, Schmid-Burgk JL, Kato H, Schindler M, Wilson IA, Geyer M, Ludwig KU, Hallberg BM, Wu NC, Schmidt FI
Science (2021) 371 [ Pubmed: 33436526 DOI: doi:10.1126/science.abe6230 ]
- Sars-cov-2 neutralizing biparatopic nanobody ve,nanobody e from lama glama,sars-cov-2 neutralizing biparatopic nanobody ve,nanobody e from lama glama (30 kDa, Protein from Lama glama)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Biparatopic nanobody ve (Complex from Vicugna pacos)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Structure of sars-cov-2 spike rbd in complex with sars-cov-2 neutralizing biparatopic nanobody ve (300 kDa, Complex)
- Spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)